Evidence map›Paper›PMID 30798619›Full record

ArticleCirculation. Heart failure2019

Recruitment of RNA Polymerase II to Metabolic Gene Promoters Is Inhibited in the Failing Heart Possibly Through PGC-1α (Peroxisome Proliferator-Activated Receptor-γ Coactivator-1α) Dysregulation.

Santosh Bhat, Adave Chin, Akihiro Shirakabe, Yoshiyuki Ikeda, Shohei Ikeda, Peiyong Zhai, Chiao-Po Hsu, Danish Sayed, Maha Abdellatif, Jaemin Byun and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Circulation. Heart failure, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
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  4. Article
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  9. Article
  10. The role of m5C methyltransferases in cardiovascular diseases.Frontiers in cardiovascular medicine · 2023
    Review
  11. Review
  12. Article
  13. PERM1 regulates energy metabolism in the heartFrontiers in cardiovascular medicine · 2022
    Article
  14. Review
  15. PGC-1Frontiers in cell and developmental biology · 2022
    Review
  16. Annals of translational medicine · 2020
    Article
  17. Article
  18. Article
  19. Multiple Levels of PGC-1α Dysregulation in Heart Failure.Frontiers in cardiovascular medicine · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 3 countries.

Santosh BhatDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Adave ChinDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Akihiro ShirakabeDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Yoshiyuki IkedaDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Shohei IkedaDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Peiyong ZhaiDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Chiao-Po HsuDivision of Cardiovascular Surgery, Department of Surgery, Veterans General Hospital, National Yang-Ming University School of Medicine, Taiwan (C.-p.H.).
Danish SayedDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Maha AbdellatifDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Jaemin ByunDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Kevin SchesingDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Fan TangDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Yimin TianDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Gopal BabuDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Guersom RaldaDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Junco S WarrenNora Eccles Harrison Cardiovascular Research and Training Institute, Department of Internal Medicine, University of Utah, Salt Lake City (J.S.W.).
Jaeyeaon ChoDepartment of Biomedical Science, College of Medicine, Avison Biomedical Research Center, Yonsei University College of Medicine, Seoul, Korea (J.C.).
Junichi SadoshimaDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Shin-Ichi OkaDepartment of Cell Biology and Molecular Medicine, Rutgers Biomedical Health Sciences, Newark, NJ (S.B., A.C., A.S., Y.I., S.I., P.Z., D.S., M.A., J.B., K.S., F.T., Y.T., G.B., G.R., J.S., S.-i.O.).
Hesco (United States) · USRutgers, The State University of New Jersey · USAims Community College · USNational Yang Ming Chiao Tung University · TWUniversity of Utah · USYonsei University · KR

Funding

Cysteine oxidation in the heartR01HL091469 · NHLBI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI Junichi Sadoshima · 2008 to 2026
$9.4M
The Role of Serine Signaling in Compensatory Cardiac HypertrophyR01HL112330 · NHLBI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI Junichi Sadoshima · 2012 to 2026
$7.5M
The Role of Thioredoxin in the Aging HeartR01AG023039 · NIA · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI SADOSHIMA, JUNICHI · 2004 to 2018
$5.8M
Regulation of myocardial growth and death by GSK-3R01HL067724 · NHLBI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI SADOSHIMA, JUNICHI · 2000 to 2018
$5.1M
Removal of damaged mitochondria by alternative autophagyR01HL138720 · NHLBI · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI SADOSHIMA, JUNICHI · 2017 to 2024
$4.7M
Regulation of myocardial growth and death by autophagyR01HL102738 · NHLBI · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI SADOSHIMA, JUNICHI · 2010 to 2014
$2.5M
Mechanisms in transcriptional regulation during cardiac hypertrophyR01HL119726 · NHLBI · RBHS-NEW JERSEY MEDICAL SCHOOL · PI ABDELLATIF, MAHA · 2013 to 2016
$1.6M
NHLBI NIH HHS R01 HL067724NHLBI NIH HHS R01 HL091469NHLBI NIH HHS R01 HL102738NHLBI NIH HHS R01 HL112330NHLBI NIH HHS R01 HL119726NHLBI NIH HHS R01 HL138720NIA NIH HHS R01 AG023039
6 · The paper itself

Abstract

backgroundProper dynamics of RNA polymerase II, such as promoter recruitment and elongation, are essential for transcription. PGC-1α (peroxisome proliferator-activated receptor [PPAR]-γ coactivator-1α), also termed PPARGC1a, is a transcriptional coactivator that stimulates energy metabolism, and PGC-1α target genes are downregulated in the failing heart. However, whether the dysregulation of polymerase II dynamics occurs in PGC-1α target genes in heart failure has not been defined. METHODS AND

resultsChromatin immunoprecipitation-sequencing revealed that reduced promoter occupancy was a major form of polymerase II dysregulation on PGC-1α target metabolic gene promoters in the pressure-overload-induced heart failure model. PGC-1α-cKO (cardiac-specific PGC-1α knockout) mice showed phenotypic similarity to the pressure-overload-induced heart failure model in wild-type mice, such as contractile dysfunction and downregulation of PGC-1α target genes, even under basal conditions. However, the protein levels of PGC-1α were neither changed in the pressure-overload model nor in human failing hearts. Chromatin immunoprecipitation assays revealed that the promoter occupancy of polymerase II and PGC-1α was consistently reduced both in the pressure-overload model and PGC-1α-cKO mice. In vitro DNA binding assays using an endogenous PGC-1α target gene promoter sequence confirmed that PGC-1α recruits polymerase II to the promoter.

conclusionsThese results suggest that PGC-1α promotes the recruitment of polymerase II to the PGC-1α target gene promoters. Downregulation of PGC-1α target genes in the failing heart is attributed, in part, to a reduction of the PGC-1α occupancy and the polymerase II recruitment to the promoters, which might be a novel mechanism of metabolic perturbations in the failing heart.

Indexed as

AnimalsDisease Models, AnimalDown-RegulationHeart FailureMiceMice, KnockoutPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPromoter Regions, GeneticRNA Polymerase IIPeroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alphaPpargc1a protein, mouseRNA Polymerase IIchromatinenergy metabolismheart failureRNA polymerase II

Identifiers

PMID30798619
PMCPMC6392084
OpenAlexW2917137742

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.