ArticleMolecular biology reports2019
Transcriptomic response of durum wheat to cold stress at reproductive stage.
Article in Molecular biology reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.
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Who cites it
24 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Transcriptome meta-analysis of abiotic stresses-responsive genes and identification of candidate transcription factors for broad stress tolerance in wheat.Protoplasma · 2023Pooled it
- Deciphering Cold Stress Resilience: Multiomics Insights in Contrasting Wheat Genotypes From the Western Himalayas.Plant biotechnology journal · 2026Article
- Global profiling of alternative splicing landscapes in response to cold stress during the cotyledon stage in cotton.BMC genomics · 2026Article
- Comparative physiological and transcriptomic analyses reveal different stress adaptation strategies controlling buckwheat chilling tolerance.BMC plant biology · 2025Article
- Decoding the CBL gene family in durum wheat: Insights into dual ABA signaling pathways and calcium-mediated drought tolerance.The plant genome · 2025Article
- Insights into TtCIPK gene family and its roles in durum wheat in response to PEG and ABA treatments.Scientific reports · 2025Article
- Review
- Advances and opportunities in unraveling cold-tolerance mechanisms in the world's primary staple food crops.The plant genome · 2024Review
- Transcriptome analysis during vernalization in wheat (Triticum aestivum L.).BMC genomic data · 2023Article
- Molecular and genetic perspectives of cold tolerance in wheat.Molecular biology reports · 2023Review
- Systematic Characterization of GATA Transcription Factors inPlants (Basel, Switzerland) · 2023Article
- A Survey of the Transcriptomic Resources in Durum Wheat: Stress Responses, Data Integration and Exploitation.Plants (Basel, Switzerland) · 2023Review
- Review
- Cold Stress Response Mechanisms in Anther Development.International journal of molecular sciences · 2022Review
- Physiology and Molecular Breeding in Sustaining Wheat Grain Setting and Quality under Spring Cold Stress.International journal of molecular sciences · 2022Review
- Transcription-associated metabolomic profiling reveals the critical role of frost tolerance in wheat.BMC plant biology · 2022Article
- Transcriptome analysis of the winter wheat Dn1 in response to cold stress.BMC plant biology · 2022Article
- Comparative Physiology and Transcriptome Analysis of Young Spikes in Response to Late Spring Coldness in Wheat (Frontiers in plant science · 2022Article
- Dynamic changes in the transcriptome landscape ofFrontiers in plant science · 2022Article
- The Roles of Temperature-Related Post-Transcriptional Regulation in Cereal Floral Development.Plants (Basel, Switzerland) · 2021Review
Corrections and comments
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Authors and funding
5 authors.
Funding
Abstract
Understanding the genetic basis of cold tolerance is a key step towards obtaining new and improved crop varieties. Current geographical distribution of durum wheat in Argentina exposes the plants to frost damage when spikes have already emerged. Biochemical pathways involved in cold tolerance are known to be early activated at above freezing temperatures. In this study we reported the transcriptome of CBW0101 spring durum wheat by merging data from untreated control and cold (5 °C) treated plant samples at reproductive stage. A total of 128,804 unigenes were predicted. Near 62% of the unigenes were annotated in at least one database. In total 876 unigenes were differentially expressed (DEGs), 562 were up-regulated and 314 down-regulated in treated samples. DEGs are involved in many critical processes including, photosynthetic activity, lipid and carbohydrate synthesis and accumulation of amino acids and seed proteins. Twenty-eight transcription factors (TFs) belonging to 14 families resulted differentially expressed from which eight families comprised of only TFs induced by cold. We also found 31 differentially expressed Long non-coding RNAs (lncRNAs), most of them up-regulated in treated plants. Two of these lncRNAs could operate via microRNAs (miRNAs) target mimic. Our results suggest a reprogramming of expression patterns in CBW0101 that affects a number of genes that is closer to the number reported in winter genotypes. These observations could partially explain its moderate tolerance (low proportion of frost-damaged spikes) when exposed to freezing days in the field.
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