Evidence map›Paper›PMID 30796712›Full record

ArticlePlant molecular biology2019

Pectin induced transcriptome of a Rhizoctonia solani strain causing sheath blight disease in rice reveals insights on key genes and RNAi machinery for development of pathogen derived resistance.

Talluri Bhaskar Rao, Ramakrishna Chopperla, Ramesh Methre, E Punniakotti, V Venkatesh, B Sailaja, M Raghurami Reddy, Arra Yugander, G S Laha, M Sheshu Madhav and 4 more

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In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 77 citations in OpenAlex.

  1. Frontiers in plant science · 2022
    Pooled it
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  10. The Resistance of Maize toInternational journal of molecular sciences · 2023
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  11. Review
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  14. Article
  15. Comparative Proteomic Analysis ofJournal of fungi (Basel, Switzerland) · 2022
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  16. Article
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  18. Genome-Wide Expression Profiling of Small RNAs in Indian Strain ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

Talluri Bhaskar RaoICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
Ramakrishna ChopperlaICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
Ramesh MethreICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
E PunniakottiICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
V VenkateshICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
B SailajaICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
M Raghurami ReddyICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
Arra YuganderICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
G S LahaICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
M Sheshu MadhavICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
R M SundaramICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
D LadhalakshmiICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
S M BalachandranICAR-Indian Institute of Rice Research, 500030, Hyderabad, India.
Satendra K MangrauthiaICAR-Indian Institute of Rice Research, 500030, Hyderabad, India. Satendra.KM@icar.gov.in.ORCID http://orcid.org/0000-0001-6316-9848
Indian Institute of Rice Research · IN

Funding

Department of Biotechnology, Ministry of Science and Technology BT/PR6466/COE/34/16/2012
6 · The paper itself

Abstract

key messageRNAi mediated silencing of pectin degrading enzyme of R. solani gives a high level of resistance against sheath blight disease of rice. Rice sheath blight disease caused by Rhizoctonia solani Kuhn (telemorph; Thanatephorus cucumeris) is one of the most devastating fungal diseases which cause severe loss to rice grain production. In the absence of resistant cultivars, the disease is currently managed through fungicides which add to environmental pollution. To explore the potential of utilizing RNA interference (RNAi)-mediated resistance against sheath blight disease, we identified genes encoding proteins and enzymes involved in the RNAi pathway in this fungal pathogen. The RNAi target genes were deciphered by RNAseq analysis of a highly virulent strain of the R. solani grown in pectin medium. Additionally, pectin metabolism associated genes of R. solani were analyzed through transcriptome sequencing of infected rice tissues obtained from six diverse rice cultivars. One of the key candidate gene AG1IA_04727 encoding polygalacturonase (PG), which was observed to be significantly upregulated during infection, was targeted through RNAi to develop disease resistance. Stable expression of PG-RNAi construct in rice showed efficient silencing of AG1IA_04727 and suppression of sheath blight disease. This study highlights important information about the existence of RNAi machinery and key genes of R. solani which can be targeted through RNAi to develop pathogen-derived resistance, thus opening an alternative strategy for developing sheath blight-resistant rice cultivars.

Indexed as

RNA InterferenceDisease ProgressionDisease ResistanceGene Expression Regulation, PlantGenes, PlantOryzaPectinsPlant DiseasesPolygalacturonaseRhizoctoniaRNA, MessengerSequence Analysis, RNATranscriptomeTransformation, GeneticPectinsPolygalacturonaseRNA, MessengerOryza sativaPolygalacturonaseRNAseqSilencingTransgenic

Identifiers

PMID30796712
OpenAlexW2917710141

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.