Evidence map›Paper›PMID 30796544›Full record

ArticleFunctional & integrative genomics2020

Optimized Cas9 expression systems for highly efficient Arabidopsis genome editing facilitate isolation of complex alleles in a single generation.

Jana Ordon, Mauro Bressan, Carola Kretschmer, Luca Dall'Osto, Sylvestre Marillonnet, Roberto Bassi, Johannes Stuttmann

Abstract read
PubMed Publisher
In one paragraph

Article in Functional & integrative genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Review
  14. Seedlessness Trait and Genome Editing-A Review.International journal of molecular sciences · 2023
    Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jana OrdonInstitute for Biology, Department of Plant Genetics, Martin Luther University Halle-Wittenberg, Weinbergweg 10, 06120, Halle (Saale), Germany.
Mauro BressanDipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134, Verona, Italy.
Carola KretschmerInstitute for Biology, Department of Plant Genetics, Martin Luther University Halle-Wittenberg, Weinbergweg 10, 06120, Halle (Saale), Germany.
Luca Dall'OstoDipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134, Verona, Italy.
Sylvestre MarillonnetDepartment of Cell and Metabolic Biology, Leibniz Institute of Plant Biochemistry, Weinberg 3, 06120, Halle (Saale), Germany.
Roberto BassiDipartimento di Biotecnologie, Università di Verona, Strada Le Grazie 15, 37134, Verona, Italy.
Johannes StuttmannInstitute for Biology, Department of Plant Genetics, Martin Luther University Halle-Wittenberg, Weinbergweg 10, 06120, Halle (Saale), Germany. johannes.stuttmann@genetik.uni-halle.de.ORCID http://orcid.org/0000-0002-6207-094X

Funding

Deutsche Forschungsgemeinschaft CRC 648Deutsche Forschungsgemeinschaft STU 642-1/1Universit? degli Studi di Verona Program CooperInt2017 and HuntingLight Ricerca di Base 2015
6 · The paper itself

Abstract

Genetic resources for the model plant Arabidopsis comprise mutant lines defective in almost any single gene in reference accession Columbia. However, gene redundancy and/or close linkage often render it extremely laborious or even impossible to isolate a desired line lacking a specific function or set of genes from segregating populations. Therefore, we here evaluated strategies and efficiencies for the inactivation of multiple genes by Cas9-based nucleases and multiplexing. In first attempts, we succeeded in isolating a mutant line carrying a 70 kb deletion, which occurred at a frequency of ~ 1.6% in the T

Indexed as

AllelesArabidopsisCRISPR-Associated Protein 9CRISPR-Cas SystemsGene DeletionGene EditingGenome, PlantMutationPromoter Regions, GeneticUbiquitinCRISPR-Associated Protein 9UbiquitinArabidopsisFAST markerLhcb1PromoterRPS5aSpCas9

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.