Evidence map›Paper›PMID 30796308›Full record

ArticleScientific reports2019

The crystal structure of the chitinase ChiA74 of Bacillus thuringiensis has a multidomain assembly.

Estefania O Juárez-Hernández, Luz E Casados-Vázquez, Luis G Brieba, Alfredo Torres-Larios, Pedro Jimenez-Sandoval, José E Barboza-Corona

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Three-Step Enzymatic Remodeling of Chitin into Bioactive Chitooligomers.Journal of agricultural and food chemistry · 2024
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Frontiers in microbiology · 2021
    Article
  11. Article
  12. Article
  13. The Crystal Structure of aInternational journal of molecular sciences · 2020
    Article
  14. Article
  15. Review
  16. Article
  17. Chitinases ofFrontiers in microbiology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Estefania O Juárez-HernándezUniversidad de Guanajuato Campus Irapuato-Salamanca, División de Ciencias de la Vida, Posgrado en Biociencias, Irapuato, Guanajuato, 36500, Mexico.
Luz E Casados-VázquezUniversidad de Guanajuato Campus Irapuato-Salamanca, División de Ciencias de la Vida, Posgrado en Biociencias, Irapuato, Guanajuato, 36500, Mexico.
Luis G BriebaLaboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (LANGEBIO-CINVESTAV), Apartado Postal 629, Irapuato, Guanajuato, 36824, Mexico.
Alfredo Torres-LariosDepartamento de Bioquímica y Biología Estructural, Instituto de Fisiología Celular, Universidad Nacional Autónoma de México, Circuito Exterior s/n, Ciudad Universitaria, Apartado Postal 70-243, Ciudad de México, 04510, Mexico.
Pedro Jimenez-SandovalLaboratorio Nacional de Genómica para la Biodiversidad, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional (LANGEBIO-CINVESTAV), Apartado Postal 629, Irapuato, Guanajuato, 36824, Mexico. pedro.jimenez@cinvestav.mx.
José E Barboza-CoronaUniversidad de Guanajuato Campus Irapuato-Salamanca, División de Ciencias de la Vida, Posgrado en Biociencias, Irapuato, Guanajuato, 36500, Mexico. josebar@ugto.mx.ORCID 0000-0002-0704-3076
Universidad de Guanajuato · MXCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional · MXUniversidad Autónoma de la Ciudad de México · MX

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

There is no structural information about any chitinase synthesized by Bacillus thuringiensis, the most successful microbial insect larvicide used worldwide. In this study, we solved the 3D structure of the chitinase ChiA74 at 2.26 Å. The crystal structure shows that ChiA74 is composed of a modular arrangement formed by (i) a catalytic region (CD), (ii) a chitinase insertion domain (CID), (iii) a fibronectin type III domain (FnIII), and (iv) a chitin binding domain (CBD). The location of the CBD with respect to the CD has no structural similarity to other chitinases with known structures. The activity of a ChiA74 lacking its secretion signal peptide (ChiA74Δsp) and a truncated version lacking its CBD/FnIII domains (ChiA74Δsp-50) did not have statistical differences in activity against colloidal chitin. However, ChiA74Δsp exhibits 4.5 and 2.0 higher activity than versions lacking the CBD (ChiA74Δsp-60) and CBD/FnIII domains (ChiA74Δsp-50), respectively, when crystalline chitin was used as substrate. Our data suggest that the CBD might plays a significant role in crystalline chitin hydrolysis. We also demonstrated the importance of the catalytic E211 in the CD, as mutants ChiA74Δsp

Indexed as

Bacillus thuringiensisBacterial ProteinsChitinChitinasesHydrolysisKineticsProtein DomainsSubstrate SpecificityBacterial ProteinsChitinChitinases

Identifiers

PMID30796308
PMCPMC6385353
OpenAlexW2915912852

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.