Evidence map›Paper›PMID 30796217›Full record

ArticleNature communications2019

Counting growth factors in single cells with infrared quantum dots to measure discrete stimulation distributions.

Phuong Le, Sung Jun Lim, Brian C Baculis, Hee Jung Chung, Kristopher A Kilian, Andrew M Smith

Abstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Structural Design of Multidentate Copolymers as Compact Quantum Dot Coatings for Live-Cell Single-Particle Imaging.Chemistry of materials : a publication of the American Chemical Society · 2022
    Article
  7. Antibody Self-Assembly Maximizes Cytoplasmic Immunostaining Accuracy of Compact Quantum Dots.Chemistry of materials : a publication of the American Chemical Society · 2021
    Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Phuong LeDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Sung Jun LimDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Brian C BaculisDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Hee Jung ChungDepartment of Molecular and Integrative Physiology, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.
Kristopher A KilianDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA.ORCID http://orcid.org/0000-0002-8963-9796
Andrew M SmithDepartment of Bioengineering, University of Illinois at Urbana-Champaign, Urbana, IL, 61801, USA. smi@illinois.edu.ORCID http://orcid.org/0000-0002-0238-4816

Funding

Super-Resolution Microscopy of Small Quantum Dots to Elucidate the Mechanisms of Alzheimer's DiseaseR01NS097610 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHUNG, HEE JUNG, SELVIN, PAUL R · 2016 to 2020
$3.3M
Tissue microenvironment (TIMe) training programT32EB019944 · NIBIB · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI BHARGAVA, ROHIT, GASKINS, REX · 2016 to 2025
$1.9M
NIBIB NIH HHS T32 EB019944NINDS NIH HHS R01 NS097610
6 · The paper itself

Abstract

The distribution of single-cell properties across a population of cells can be measured using diverse tools, but no technology directly quantifies the biochemical stimulation events regulating these properties. Here we report digital counting of growth factors in single cells using fluorescent quantum dots and calibrated three-dimensional deconvolution microscopy (QDC-3DM) to reveal physiologically relevant cell stimulation distributions. We calibrate the fluorescence intensities of individual compact quantum dots labeled with epidermal growth factor (EGF) and demonstrate the necessity of near-infrared emission to overcome intrinsic cellular autofluoresence at the single-molecule level. When applied to human triple-negative breast cancer cells, we observe proportionality between stimulation and both receptor internalization and inhibitor response, reflecting stimulation heterogeneity contributions to intrinsic variability. We anticipate that QDC-3DM can be applied to analyze any peptidic ligand to reveal single-cell correlations between external stimulation and phenotypic variability, cell fate, and drug response.

Indexed as

Cell Line, TumorEpidermal Growth FactorErbB ReceptorsFluorescenceFluorescent DyesHumansImaging, Three-DimensionalMicroscopy, FluorescenceQuantum DotsSingle-Cell AnalysisTriple Negative Breast NeoplasmsEpidermal Growth FactorErbB ReceptorsFluorescent Dyes

Identifiers

PMID30796217
PMCPMC6385258

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.