Evidence map›Paper›PMID 30794539›Full record

ArticlePLoS genetics2019

A DNA repair protein and histone methyltransferase interact to promote genome stability in the Caenorhabditis elegans germ line.

Bing Yang, Xia Xu, Logan Russell, Matthew T Sullenberger, Judith L Yanowitz, Eleanor M Maine

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 23 citations in OpenAlex.

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  12. eLife · 2020
    Article
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  15. The Epigenetics of Aging in Invertebrates.International journal of molecular sciences · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Bing YangDepartment of Biology, Syracuse University, Syracuse, New York, United States of America.
Xia XuDepartment of Biology, Syracuse University, Syracuse, New York, United States of America.ORCID 0000-0002-3993-093X
Logan RussellDepartment of Obstetrics, Gynecology, and Reproductive Sciences, Magee-Womens Research Institute, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.
Matthew T SullenbergerDepartment of Biology, Syracuse University, Syracuse, New York, United States of America.
Judith L YanowitzDepartment of Obstetrics, Gynecology, and Reproductive Sciences, Magee-Womens Research Institute, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, United States of America.
Eleanor M MaineDepartment of Biology, Syracuse University, Syracuse, New York, United States of America.ORCID 0000-0002-6569-2701
Syracuse University · USUniversity of Pittsburgh · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Undergraduate Summer Research Supplement for 5R01GM104007-07: Characterization of a Meiotic Crossover Surveillance SystemR01GM104007 · NIGMS · MAGEE-WOMEN'S RES INST AND FOUNDATION · PI YANOWITZ, JUDITH L · 2013 to 2021
$2.6M
Germline Silencing of Unpaired ChromatinR01GM089818 · NIGMS · SYRACUSE UNIVERSITY · PI MAINE, ELEANOR M · 2010 to 2013
$1.1M
Meiotic regulation of chromatin structureR15GM119029 · NIGMS · SYRACUSE UNIVERSITY · PI MAINE, ELEANOR M · 2016 to 2016
$427k
NIGMS NIH HHS R01 GM089818NIGMS NIH HHS R01 GM104007NIGMS NIH HHS R15 GM119029NIH HHS P40 OD010440
6 · The paper itself

Abstract

Histone modifications regulate gene expression and chromosomal events, yet how histone-modifying enzymes are targeted is poorly understood. Here we report that a conserved DNA repair protein, SMRC-1, associates with MET-2, the C. elegans histone methyltransferase responsible for H3K9me1 and me2 deposition. We used molecular, genetic, and biochemical methods to investigate the biological role of SMRC-1 and to explore its relationship with MET-2. SMRC-1, like its mammalian ortholog SMARCAL1, provides protection from DNA replication stress. SMRC-1 limits accumulation of DNA damage and promotes germline and embryonic viability. MET-2 and SMRC-1 localize to mitotic and meiotic germline nuclei, and SMRC-1 promotes an increase in MET-2 abundance in mitotic germline nuclei upon replication stress. In the absence of SMRC-1, germline H3K9me2 generally decreases after multiple generations at high culture temperature. Genetic data are consistent with MET-2 and SMRC-1 functioning together to limit replication stress in the germ line and in parallel to promote other germline processes. We hypothesize that loss of SMRC-1 activity causes chronic replication stress, in part because of insufficient recruitment of MET-2 to nuclei.

Indexed as

Genomic InstabilityAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDNA HelicasesDNA RepairDNA ReplicationFemaleGerm CellsHistone-Lysine N-MethyltransferaseHistonesMaleProtein BindingCaenorhabditis elegans ProteinsDNA HelicasesHistone-Lysine N-MethyltransferaseHistonesMet-2 protein, C eleganssmrc-1 protein, C elegans

Identifiers

PMID30794539
PMCPMC6402707
OpenAlexW2916271424

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.