Evidence map›Paper›PMID 30793388›Full record

ArticleMolecular microbiology2019

Structural basis of transcriptional regulation by the HigA antitoxin.

Marc A Schureck, Jeffrey Meisner, Eric D Hoffer, Dongxue Wang, Nina Onuoha, Shein Ei Cho, Pete Lollar, Christine M Dunham

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. The R plasmid pRAS2 in the fish pathogenFrontiers in microbiology · 2026
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  9. Article
  10. Article
  11. Prokaryote toxin-antitoxin modules: Complex regulation of an unclear function.Protein science : a publication of the Protein Society · 2021
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Marc A SchureckDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Jeffrey MeisnerDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Eric D HofferDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Dongxue WangDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Nina OnuohaDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Shein Ei ChoDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Pete LollarAflac Cancer and Blood Disorders Center, Children's Healthcare of Atlanta, Atlanta, GA, 30322, USA.
Christine M DunhamDepartment of Biochemistry, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Emory University · US

Funding

Overall EvaluationP41GM103403 · NIGMS · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2012 to 2017
$14.3M
Training Program in Biochemistry, Cell and Molecular BiologyT32GM008367 · NIGMS · EMORY UNIVERSITY · PI BOISE, LAWRENCE H., CORBETT, ANITA H. · 1990 to 2019
$5.6M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Mechanism of HigB-mediated ribosome-dependent mRNA degradationF31GM108351 · NIGMS · EMORY UNIVERSITY · PI SCHURECK, MARC ANTHONY · 2013 to 2014
$62k
NCRR NIH HHS S10 RR029205NIGMS NIH HHS F31 GM108351NIGMS NIH HHS P41 GM103403NIGMS NIH HHS T32 GM008367
6 · The paper itself

Abstract

Bacterial toxin-antitoxin systems are important factors implicated in growth inhibition and plasmid maintenance. Type II toxin-antitoxin pairs are regulated at the transcriptional level by the antitoxin itself. Here, we examined how the HigA antitoxin regulates the expression of the Proteus vulgaris higBA toxin-antitoxin operon from the Rts1 plasmid. The HigBA complex adopts a unique architecture suggesting differences in its regulation as compared to classical type II toxin-antitoxin systems. We find that the C-terminus of the HigA antitoxin is required for dimerization and transcriptional repression. Further, the HigA structure reveals that the C terminus is ordered and does not transition between disorder-to-order states upon toxin binding. HigA residue Arg40 recognizes a TpG dinucleotide in higO2, an evolutionary conserved mode of recognition among prokaryotic and eukaryotic transcription factors. Comparison of the HigBA and HigA-higO2 structures reveals the distance between helix-turn-helix motifs of each HigA monomer increases by ~4 Å in order to bind to higO2. Consistent with these data, HigBA binding to each operator is twofold less tight than HigA alone. Together, these data show the HigB toxin does not act as a co-repressor suggesting potential novel regulation in this toxin-antitoxin system.

Indexed as

Gene Expression Regulation, BacterialBacterial ProteinsOperonPromoter Regions, GeneticProtein MultimerizationProteus vulgarisRepressor ProteinsToxin-Antitoxin SystemsBacterial ProteinsHigA protein, Proteus vulgarisHigB protein, Proteus vulgarisRepressor Proteins

Identifiers

PMID30793388
PMCPMC6561789
OpenAlexW2916004231

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.