Evidence map›Paper›PMID 30792446›Full record

ArticleScientific reports2019

Designing a multi-epitope based vaccine to combat Kaposi Sarcoma utilizing immunoinformatics approach.

Varun Chauhan, Tripti Rungta, Kapil Goyal, Mini P Singh

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 98 papers.

0numbers the graph read from it
0cells of the map it votes in
98citing papers in PubMed
9.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

98 citing papers in PubMed, 202 citations in OpenAlex.

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38 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Varun ChauhanDepartment of Virology, Post Graduate Institute of Medical Education and Research (PGIMER), Chandigarh, Punjab, 160012, India.
Tripti RungtaDepartment of Virology, Post Graduate Institute of Medical Education and Research (PGIMER), Chandigarh, Punjab, 160012, India.
Kapil GoyalDepartment of Virology, Post Graduate Institute of Medical Education and Research (PGIMER), Chandigarh, Punjab, 160012, India.
Mini P SinghDepartment of Virology, Post Graduate Institute of Medical Education and Research (PGIMER), Chandigarh, Punjab, 160012, India. minipsingh@gmail.com.
Post Graduate Institute of Medical Education and Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kaposi's sarcoma-associated herpesvirus (KSHV) responsible for causing Kaposi sarcoma (KS), an opportunistic angioproliferative neoplasm is emerging rapidly. Despite this there is no permanent cure for this disease. The present study was aimed to design a multi-epitope based vaccine targeting the major glycoproteins of KSHV which plays an important role in the virus entry. After the application of rigorous immunoinformatics analysis and several immune filters, the multi-epitope vaccine was constructed, consisting of CD4, CD8 and IFN-γ inducing epitopes. Several physiochemical characteristics, allergenicity and antigenicity of the multi-epitope vaccine were analyzed in order to ensure its safety and immunogenicity. Further, the binding affinity and stability of the vaccine with Toll like receptor -9 (TLR-9) was analyzed by molecular docking and dynamics simulation studies. In addition, an in silico cloning was performed to ensure the expression and translation efficiency of the vaccine, utilizing pET-28a (+) vector. Such T-cell-based immunotherapies which leverage this mechanism could prove their potential against cancer. Further, the authors propose to test the present findings in the lab settings to ensure the safety, immunogenicity and efficacy of the presented vaccine which may help in controlling KSHV infection.

Indexed as

Amino Acid SequenceCancer VaccinesCell ProliferationComputational BiologyEpitopes, B-LymphocyteEpitopes, T-LymphocyteGlycoproteinsHerpesvirus 8, HumanHumansMolecular Docking SimulationSarcoma, KaposiToll-Like Receptor 9Vaccines, SubunitCancer VaccinesEpitopes, B-LymphocyteEpitopes, T-LymphocyteGlycoproteinsTLR9 protein, humanToll-Like Receptor 9Vaccines, Subunit

Identifiers

PMID30792446
PMCPMC6385272
OpenAlexW2918075940

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.