Evidence map›Paper›PMID 30790445›Full record

ArticleProteomics2019

Detection and Structural Characterization of Ether Glycerophosphoethanolamine from Cortical Lysosomes Following Traumatic Brain Injury Using UPLC-HDMS

Jace W Jones, Chinmoy Sarkar, Marta M Lipinski, Maureen A Kane

Open access · greenAbstract read
In one paragraph

Article in Proteomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
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  4. mBio · 2024
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  5. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Jace W JonesUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD, 21201, USA.
Chinmoy SarkarUniversity of Maryland, School of Medicine, Department of Anesthesiology, Baltimore, MD, 21201, USA.
Marta M LipinskiUniversity of Maryland, School of Medicine, Department of Anesthesiology, Baltimore, MD, 21201, USA.
Maureen A KaneUniversity of Maryland, School of Pharmacy, Department of Pharmaceutical Sciences, Baltimore, MD, 21201, USA.
University of Maryland, Baltimore · US

Funding

The new roles of the autophagy-lysosomal pathway in spinal cord injury-mediated dementiaR01NS094527 · NINDS · UNIVERSITY OF MARYLAND BALTIMORE · PI MARTA M LIPINSKI, Junfang Wu · 2016 to 2026
$3.5M
Function and Mechanisms of Autophagy-Lysosomal Pathway in Traumatic Brain InjuryR01NS091218 · NINDS · UNIVERSITY OF MARYLAND BALTIMORE · PI LIPINSKI, MARTA M · 2015 to 2019
$1.8M
NINDS NIH HHS R01 NS091218NINDS NIH HHS R01NS 091218NINDS NIH HHS R01 NS094527
6 · The paper itself

Abstract

The use of ultra performance liquid chromatography coupled to data independent tandem mass spectrometry with traveling wave ion mobility for detection and structural identification of ether-linked glycerophosphoethanolamine is described. The experimental design generates 4D data (chromatographic retention time, precursor accurate mass, drift time with associated calculated collisional cross-section, and time-aligned accurate mass diagnostic product ions) for each ionization mode. Confident structure identification depends on satisfying 4D data confirmation in both positive and negative ion mode. Using this methodology, a number of ether-linked glycerophosphoethanolamine lipids are structurally elucidated from mouse brain lysosomes. It is further determined that several ether-linked glycerophosphoethanolamine structures are differentially abundant between lysosomes isolated from mouse cortex following traumatic brain injury as compared to that of sham animals. The combined effort of aligning multi-dimensional mass spectrometry data with a well-defined traumatic brain injury model lays the foundation for gaining mechanistic insight in the role lysosomal membrane damage plays in neuronal cell death following brain injury.

Indexed as

AnimalsBrain Injuries, TraumaticCerebral CortexChromatography, High Pressure LiquidDisease Models, AnimalEthersLysosomesMicePhosphatidylethanolaminesSpectrometry, Mass, Electrospray IonizationEthersglycerophosphoethanolaminePhosphatidylethanolaminesdata independent tandem mass spectrometryether lipidsglycerophosphoethanolaminelipid structurelysosomestraumatic brain injurytraveling wave ion mobilityUPLC-HDMSE

Identifiers

PMID30790445
PMCPMC7565256
OpenAlexW2915646760

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.