Evidence map›Paper›PMID 30788890›Full record

ArticleMovement disorders : official journal of the Movement Disorder Society2019

SMPD1 mutations, activity, and α-synuclein accumulation in Parkinson's disease.

Roy N Alcalay, Victoria Mallett, Benoît Vanderperre, Omid Tavassoly, Yves Dauvilliers, Richard Y J Wu, Jennifer A Ruskey, Claire S Leblond, Amirthagowri Ambalavanan, Sandra B Laurent and 24 more

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In one paragraph

Article in Movement disorders : official journal of the Movement Disorder Society, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
7.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 112 citations in OpenAlex.

  1. Pooled it
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

34 authors at 8 institutions in 5 countries.

Roy N AlcalayDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Victoria MallettMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Benoît VanderperreMcGill Parkinson Program and Neurodegenerative Diseases Group, Montreal Neurological Institute, McGill University, Montréal, QC, Canada.
Omid TavassolyMcGill Parkinson Program and Neurodegenerative Diseases Group, Montreal Neurological Institute, McGill University, Montréal, QC, Canada.
Yves DauvilliersSleep Unit, National Reference Network for Narcolepsy, Department of Neurology Hôpital-Gui-de Chauliac, CHU Montpellier, INSERM U1061, France.
Richard Y J WuMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Jennifer A RuskeyMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Claire S LeblondMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Amirthagowri AmbalavananMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Sandra B LaurentMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Dan SpiegelmanMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Alexandre Dionne-LaporteMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Christopher LiongDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Oren A LevyDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Stanley FahnDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Cheryl WatersDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Sheng-Han KuoDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Wendy K ChungDepartment of Medicine, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Blair FordDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Karen S MarderDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Un Jung KangDepartment of Neurology, College of Physicians and Surgeons, Columbia University, New York, NY, USA.
Sharon Hassin-BaerSackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Lior GreenbaumSackler Faculty of Medicine, Tel Aviv University, Tel Aviv, Israel.
Jean-Francois TrempeDepartment of Pharmacology & Therapeutics, McGill University, Montréal, Québec, Canada.
Pavlina WolfTranslational Science, Sanofi, Framingham, MA, USA.
Petra OlivaTranslational Science, Sanofi, Framingham, MA, USA.
Xiaokui Kate ZhangTranslational Science, Sanofi, Framingham, MA, USA.
Lorraine N ClarkTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, New York, NY, USA.
Melanie LangloisAxe neurosciences du CHU de Québec - Université Laval, Québec, QC, Canada.
Patrick A DionMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Edward A FonMcGill Parkinson Program and Neurodegenerative Diseases Group, Montreal Neurological Institute, McGill University, Montréal, QC, Canada.
Nicolas DupreAxe neurosciences du CHU de Québec - Université Laval, Québec, QC, Canada.
Guy A RouleauMontreal Neurological Institute, McGill University, Montréal, QC, Canada.
Ziv Gan-OrMontreal Neurological Institute, McGill University, Montréal, QC, Canada.ORCID 0000-0003-0332-234X
Montreal Neurological Institute and Hospital · CAColumbia University · USSanofi (United States) · USTel Aviv University · ILUniversité Laval · CAInserm · FRMcGill University · CANew York Genome Center · US

Funding

Clinical and Translational Science AwardUL1TR000040 · NCATS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI GINSBERG, HENRY N · 2012 to 2015
$26.2M
GENETIC EPIDEMIOLOGY OF PARKINSONS DISEASER01NS036630 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARDER, KAREN S · 1998 to 2008
$6.8M
Columbia University Medical Center - Weill Cornell Medical Center NEXT SiteU10NS077267 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CHIRIBOGA, CLAUDIA A, MARDER, KAREN S · 2011 to 2017
$2.2M
The striatal cholinergic interneurons in Parkinson's disease and treatmentR01NS101982 · NINDS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KANG, UN JUNG · 2017 to 2020
$1.8M
The role of glucocerebrosidase in Parkinson's diseaseK02NS080915 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ALCALAY, ROY · 2012 to 2016
$905k
Genetic Epidemiology of Parkinson's DiseaseR56NS036630 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARDER, KAREN S · 2010 to 2010
$500k
Plasticity of bridge collaterals in Parkinonian state and treatmentR03NS096494 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI KANG, UN JUNG · 2016 to 2017
$160k
Brookdale FoundationCanadian Consortium om Neurodegeneration in Aging (CCNA)CIHRFonds de Recherche du Québec - SantéMichael J. Fox Foundation for Parkinson's ResearchNCATS NIH HHS UL1 TR000040NIH HHS K02NS080915NIH HHS UL1 TR000040NINDS NIH HHS K02 NS080915NINDS NIH HHS R01 NS036630NINDS NIH HHS R01 NS101982NINDS NIH HHS R03 NS096494NINDS NIH HHS R56 NS036630NINDS NIH HHS U10 NS077267Parkinson's Disease Foundation
6 · The paper itself

Abstract

backgroundSMPD1 (acid-sphingomyelinase) variants have been associated with Parkinson's disease in recent studies. The objective of this study was to further investigate the role of SMPD1 mutations in PD.

methodsSMPD1 was sequenced in 3 cohorts (Israel Ashkenazi Jewish cohort, Montreal/Montpellier, and New York), including 1592 PD patients and 975 controls. Additional data were available for 10,709 Ashkenazi Jewish controls. Acid-sphingomyelinase activity was measured by a mass spectrometry-based assay in the New York cohort. α-Synuclein levels were measured in vitro following CRISPR/Cas9-mediated knockout and siRNA knockdown of SMPD1 in HeLa and BE(2)-M17 cells. Lysosomal localization of acid-sphingomyelinase with different mutations was studied, and in silico analysis of their effect on acid-sphingomyelinase structure was performed.

resultsSMPD1 mutations were associated with PD in the Ashkenazi Jewish cohort, as 1.4% of PD patients carried the p.L302P or p.fsP330 mutation, compared with 0.37% in 10,709 Ashkenazi Jewish controls (OR, 3.7; 95%CI, 1.6-8.2; P = 0.0025). In the Montreal/Montpellier cohort, the p.A487V variant was nominally associated with PD (1.5% versus 0.14%; P = 0.0065, not significant after correction for multiple comparisons). Among PD patients, reduced acid-sphingomyelinase activity was associated with a 3.5- to 5.8-year earlier onset of PD in the lowest quartile versus the highest quartile of acid-sphingomyelinase activity (P = 0.01-0.001). We further demonstrated that SMPD1 knockout and knockdown resulted in increased α-synuclein levels in HeLa and BE(2)-M17 dopaminergic cells and that the p.L302P and p.fsP330 mutations impair the traffic of acid-sphingomyelinase to the lysosome.

conclusionsOur results support an association between SMPD1 variants, acid-sphingomyelinase activity, and PD. Furthermore, they suggest that reduced acid-sphingomyelinase activity may lead to α-synuclein accumulation. © 2019 International Parkinson and Movement Disorder Society.

Indexed as

Genetic Predisposition to DiseaseAgedalpha-SynucleinBrainFemaleGene Knockdown TechniquesHeLa CellsHumansJewsMaleMiddle AgedMutationParkinson DiseaseSphingomyelin Phosphodiesterasealpha-SynucleinSMPD1 protein, humanSphingomyelin Phosphodiesteraseacid sphingomyelinasegeneticsParkinson's diseaseSMPD1α-synuclein

Identifiers

PMID30788890
PMCPMC6469643
OpenAlexW2917598617

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.