Evidence map›Paper›PMID 30788639›Full record

ArticleJournal of industrial microbiology & biotechnology2019

Identification of biosynthetic genes for the β-carboline alkaloid kitasetaline and production of the fluorinated derivatives by heterologous expression.

Shohei Ueda, Haruo Ikeda, Takushi Namba, Yukinori Ikejiri, Yuri Nishimoto, Masayoshi Arai, Takuya Nihira, Shigeru Kitani

Abstract read
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In one paragraph

Article in Journal of industrial microbiology & biotechnology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.3field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Shohei UedaInternational Center for Biotechnology, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Haruo IkedaKitasato Institute for Life Sciences, Kitasato University, 1-15-1 Kitasato, Sagamihara, Kanagawa, 252-0373, Japan.
Takushi NambaScience Research Center, Kochi University, Kohasu, Oko-cho, Nankoku, Kochi, 783-8505, Japan.
Yukinori IkejiriInternational Center for Biotechnology, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Yuri NishimotoInternational Center for Biotechnology, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Masayoshi AraiGraduate School of Pharmaceutical Sciences, Osaka University, 1-6 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Takuya NihiraInternational Center for Biotechnology, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan.
Shigeru KitaniInternational Center for Biotechnology, Osaka University, 2-1 Yamadaoka, Suita, Osaka, 565-0871, Japan. kitani@icb.osaka-u.ac.jp.ORCID http://orcid.org/0000-0003-2583-6798
Osaka University · JPKitasato University · JPKōchi University · JPMahidol University · TH

Funding

Japan Society for the Promotion of Science 18H04618Japan Society for the Promotion of Science 18K05390The Japan Association for Chemical Innovation New Chemical Technology Research Encouragement Award
6 · The paper itself

Abstract

β-Carboline alkaloids exhibit a broad spectrum of pharmacological and biological activities and are widely distributed in nature. Genetic information on the biosynthetic mechanism of β-carboline alkaloids has not been accumulated in bacteria, because there are only a few reports on the microbial β-carboline compounds. We previously isolated kitasetaline, a mercapturic acid derivative of a β-carboline compound, from the genetically modified Kitasatospora setae strain and found a plausible biosynthetic gene cluster for kitasetaline. Here, we identified and characterized three kitasetaline (ksl) biosynthetic genes for the formation of the β-carboline core structure and a gene encoding mycothiol-S-conjugate amidase for the modification of the N-acetylcysteine moiety by using heterologous expression. The proposed model of kitasetaline biosynthesis shows unique enzymatic systems for β-carboline alkaloids. In addition, feeding fluorotryptophan to the heterologous Streptomyces hosts expressing the ksl genes led to the generation of unnatural β-carboline alkaloids exerting novel/potentiated bioactivities.

Indexed as

AcetylcysteineAlkaloidsAmidohydrolasesCarbolinesCell Line, TumorFluorineHumansMultigene FamilyMutationRecombinant ProteinsSpectrometry, Mass, Electrospray IonizationStreptomycesTryptophanAcetylcysteineAlkaloidsAmidohydrolasesCarbolinesFluorinekitasetalinemycothiol S-conjugate amidasenorharmanRecombinant ProteinsTryptophanFluorinationMycothiolN-AcetylcysteineStreptomycesβ-Carboline alkaloid

Identifiers

PMID30788639
OpenAlexW2915993647

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.