Evidence map›Paper›PMID 30788511›Full record

ArticleNucleic acids research2019

Double autoinhibition mechanism of signal transduction ATPases with numerous domains (STAND) with a tetratricopeptide repeat sensor.

María-Natalia Lisa, Virginija Cvirkaite-Krupovic, Evelyne Richet, Gwenaëlle André-Leroux, Pedro M Alzari, Ahmed Haouz, Olivier Danot

Abstract read
In one paragraph

Article in Nucleic acids research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

María-Natalia LisaUnité de Microbiologie Structurale, Institut Pasteur, CNRS UMR 3528 & Université Paris Diderot, 75724 Paris Cedex 15, France.
Virginija Cvirkaite-KrupovicUnité de Génétique moléculaire, Institut Pasteur, CNRS ERL 3526, 75724 Paris Cedex 15, France.
Evelyne RichetUnité de Génétique moléculaire, Institut Pasteur, CNRS ERL 3526, 75724 Paris Cedex 15, France.
Gwenaëlle André-LerouxINRA, Unité MaIAGE, Université Paris-Saclay, 78352 Jouy-en-Josas CEDEX, France.
Pedro M AlzariUnité de Microbiologie Structurale, Institut Pasteur, CNRS UMR 3528 & Université Paris Diderot, 75724 Paris Cedex 15, France.
Ahmed HaouzC2RT-Plateforme de cristallographie, Institut Pasteur, CNRS UMR 3528, 75724 Paris Cedex 15, France.
Olivier DanotUnité de Génétique moléculaire, Institut Pasteur, CNRS ERL 3526, 75724 Paris Cedex 15, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Upon triggering by their inducer, signal transduction ATPases with numerous domains (STANDs), initially in monomeric resting forms, multimerize into large hubs that activate target macromolecules. This process requires conversion of the STAND conserved core (the NOD) from a closed form encasing an ADP molecule to an ATP-bound open form prone to multimerize. In the absence of inducer, autoinhibitory interactions maintain the NOD closed. In particular, in resting STAND proteins with an LRR- or WD40-type sensor domain, the latter establishes interactions with the NOD that are disrupted in the multimerization-competent forms. Here, we solved the first crystal structure of a STAND with a tetratricopeptide repeat sensor domain, PH0952 from Pyrococcus horikoshii, revealing analogous NOD-sensor contacts. We use this structural information to experimentally demonstrate that similar interactions also exist in a PH0952 homolog, the MalT STAND archetype, and actually contribute to the MalT autoinhibition in vitro and in vivo. We propose that STAND activation occurs by stepwise release of autoinhibitory contacts coupled to the unmasking of inducer-binding determinants. The MalT example suggests that STAND weak autoinhibitory interactions could assist the binding of inhibitory proteins by placing in register inhibitor recognition elements born by two domains.

Indexed as

Protein ConformationAdenosine TriphosphatasesCrystallography, X-RayEscherichia coliHumansModels, MolecularProtein DomainsProtein Structure, TertiarySignal TransductionTetratricopeptide RepeatWD40 RepeatsAdenosine Triphosphatases

Identifiers

PMID30788511
PMCPMC6468293

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.