Evidence map›Paper›PMID 30788115›Full record

ArticleUnited European gastroenterology journal2019

First genotype-phenotype study reveals HLA-DQβ1 insertion heterogeneity in high-resolution manometry achalasia subtypes.

Zuzana Vackova, Stefan Niebisch, Tania Triantafyllou, Jessica Becker, Timo Hess, Nicole Kreuser, Stavroula Kanoni, Panos Deloukas, Vitalia Schüller, Sophie Km Heinrichs and 8 more

Open access · bronzeAbstract readMulticenter Study
In one paragraph

Article in United European gastroenterology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.2field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Focus on Achalasia in the Omics Era.International journal of molecular sciences · 2024
    Review
  3. Imbalance of Innate and Adaptive Immunity in Esophageal Achalasia.Journal of neurogastroenterology and motility · 2023
    Article
  4. Achalasia: The Current Clinical Dilemma and Possible Pathogenesis.Journal of neurogastroenterology and motility · 2023
    Review
  5. Achalasia.Nature reviews. Disease primers · 2022
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 6 institutions in 4 countries.

Zuzana VackovaDepartment of Hepatogastroenterology, Institute for Clinical and Experimental Medicine, Prague, Czech Republic.
Stefan NiebischDepartment of Visceral, Transplant, Thoracic and Vascular Surgery, University Hospital of Leipzig, Leipzig, Germany.
Tania TriantafyllouForegut Surgery Department, Hippokration General Hospital of Athens, Athens, Greece.
Jessica BeckerInstitute of Human Genetics, University of Bonn, Bonn, Germany.
Timo HessInstitute of Human Genetics, University of Bonn, Bonn, Germany.
Nicole KreuserDepartment of Visceral, Transplant, Thoracic and Vascular Surgery, University Hospital of Leipzig, Leipzig, Germany.
Stavroula KanoniWilliam Harvey Research Institute, University of London, London, UK.
Panos DeloukasWilliam Harvey Research Institute, University of London, London, UK.
Vitalia SchüllerInstitute of Human Genetics, University of Bonn, Bonn, Germany.
Sophie Km HeinrichsInstitute of Human Genetics, University of Bonn, Bonn, Germany.
René ThiemeDepartment of Visceral, Transplant, Thoracic and Vascular Surgery, University Hospital of Leipzig, Leipzig, Germany.ORCID 0000-0002-0537-3979
Markus M NöthenInstitute of Human Genetics, University of Bonn, Bonn, Germany.
Michael KnappInstitute for Medical Biometry, Informatics and Epidemiology (IMBIE), University of Bonn, Bonn, Germany.
Julius SpicakDepartment of Hepatogastroenterology, Institute for Clinical and Experimental Medicine, Prague, Czech Republic.
Ines GockelDepartment of Visceral, Transplant, Thoracic and Vascular Surgery, University Hospital of Leipzig, Leipzig, Germany.
Johannes SchumacherInstitute of Human Genetics, University of Bonn, Bonn, Germany.
Dimitris TheodorouForegut Surgery Department, Hippokration General Hospital of Athens, Athens, Greece.
Jan MartinekDepartment of Hepatogastroenterology, Institute for Clinical and Experimental Medicine, Prague, Czech Republic.
University of Bonn · DEUniversity Hospital Leipzig · DEHippocration General Hospital · GRInstitute of Clinical and Experimental Medicine · CZUniversity of London · GBUniversity of Ostrava · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Achalasia is a primary oesophageal motility disorder. Although aetiology remains mainly unknown, a genetic risk variant, rs28688207 in HLA-DQB1, showed strong achalasia association suggesting involvement of immune-mediated processes in the pathogenesis. High-resolution manometry recognises three types of achalasia. The aim of our study was to perform the first genotype-phenotype analysis investigating the frequency of rs28688207 across the high-resolution manometry subtypes. Methods: This was a cross-sectional retrospective study. Achalasia patients from tertiary centres in the Czech Republic ( Results: A total of 347 achalasia patients (type I - 89, II - 210, III - 48) were included. The overall frequency of the rs28688207 was 10.3%. The distribution of the insertion was significantly different across the high-resolution manometry subtypes ( Conclusion: The frequency of the HLA-DQB1 insertion differs among high-resolution manometry achalasia subtypes. The insertion is most prevalent in type I, suggesting that immune-mediated mechanisms triggered by the insertion may play a more prominent role in the pathogenesis of this subtype.

Indexed as

Genetic HeterogeneityGenotypeManometryPhenotypeAllelesCross-Sectional StudiesCzech RepublicEsophageal AchalasiaGeography, MedicalGermanyGreeceHLA-DQ beta-ChainsHumansPolymorphism, Single NucleotidePopulation SurveillancePrevalenceHLA-DQB1 antigenHLA-DQ beta-ChainsAchalasiagenetic risk varianthigh-resolution manometryHLA-DQβ1

Identifiers

PMID30788115
PMCPMC6374847
OpenAlexW2895600822

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.