Evidence map›Paper›PMID 30787435›Full record

ArticleNature2019

Bacterial cGAS-like enzymes synthesize diverse nucleotide signals.

Aaron T Whiteley, James B Eaglesham, Carina C de Oliveira Mann, Benjamin R Morehouse, Brianna Lowey, Eric A Nieminen, Olga Danilchanka, David S King, Amy S Y Lee, John J Mekalanos and 1 more

Open access · greenAbstract read
In one paragraph

Article in Nature, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 230 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
230citing papers in PubMed, 1 pooled it
36.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

230 citing papers in PubMed, 1 synthesis or guideline pooled it, 375 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
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  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Therapeutic targeting of the cGAS-STING pathway in human disease.The Journal of clinical investigation · 2026
    Review
  12. Bacterial and human exonucleases mediate interkingdom antiviral immunity.bioRxiv : the preprint server for biology · 2026
    Article
  13. Crystal structure of the cytosolic Nudix-like domain of CD-NTase-associated protein 16 from Enterococcus faecalis.Acta crystallographica. Section F, Structural biology communications · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Balancing of immune activation and suppression during phage infection.bioRxiv : the preprint server for biology · 2026
    Article
  20. Article

170 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Aaron T WhiteleyDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
James B EagleshamDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
Carina C de Oliveira MannDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
Benjamin R MorehouseDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
Brianna LoweyDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
Eric A NieminenDepartment of Cancer Immunology and Virology, Dana-Farber Cancer Institute, Boston, MA, USA.
Olga DanilchankaDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
David S KingHHMI Mass Spectrometry Laboratory, University of California, Berkeley, Berkeley, CA, USA.
Amy S Y LeeDepartment of Biology, Brandeis University, Waltham, MA, USA.
John J MekalanosDepartment of Microbiology, Harvard Medical School, Boston, MA, USA. john_mekalanos@hms.harvard.edu.
Philip J KranzuschDepartment of Microbiology, Harvard Medical School, Boston, MA, USA. philip_kranzusch@dfci.harvard.edu.
Dana-Farber Cancer Institute · USHarvard University · USBrandeis University · USMerck & Co., Inc., Rahway, NJ, USA (United States) · USUniversity of California, Berkeley · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI MALCOLM S. CAPEL · 2018 to 2026
$34.2M
Genetic analysis of toxinogenesis of Vibrio choleraeR37AI018045 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI John Joseph Mekalanos · 1989 to 2026
$12.8M
COORDINATE REGULATION OF BACTERIAL VIRULENCE FACTORSR01AI026289 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI MEKALANOS, JOHN JOSEPH · 1988 to 2018
$8.3M
Genetic Analysis of Toxinogenesis in Vibrio CholeraeR01AI018045 · NIAID · HARVARD MEDICAL SCHOOL · PI MEKALANOS, JOHN JOSEPH · 2009 to 2018
$6.7M
Cancer Immunology Training GrantT32CA207021 · NCI · DANA-FARBER CANCER INST · PI WUCHERPFENNIG, KAI W · 2016 to 2020
$2.4M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Pilatus 6mS10OD021832 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ADAMS, PAUL DAVID · 2016 to 2016
$980k
NCI NIH HHS T32 CA207021NCRR NIH HHS S10 RR029205NIAID NIH HHS R01 AI018045NIAID NIH HHS R01 AI026289NIAID NIH HHS R37 AI018045NIGMS NIH HHS P30 GM124165NIH HHS S10 OD021527NIH HHS S10 OD021832
6 · The paper itself

Abstract

Cyclic dinucleotides (CDNs) have central roles in bacterial homeostasis and virulence by acting as nucleotide second messengers. Bacterial CDNs also elicit immune responses during infection when they are detected by pattern-recognition receptors in animal cells. Here we perform a systematic biochemical screen for bacterial signalling nucleotides and discover a large family of cGAS/DncV-like nucleotidyltransferases (CD-NTases) that use both purine and pyrimidine nucleotides to synthesize a diverse range of CDNs. A series of crystal structures establish CD-NTases as a structurally conserved family and reveal key contacts in the enzyme active-site lid that direct purine or pyrimidine selection. CD-NTase products are not restricted to CDNs and also include an unexpected class of cyclic trinucleotide compounds. Biochemical and cellular analyses of CD-NTase signalling nucleotides demonstrate that these cyclic di- and trinucleotides activate distinct host receptors and thus may modulate the interaction of both pathogens and commensal microbiota with their animal and plant hosts.

Indexed as

AnimalsBacterial ProteinsCrystallography, X-RayCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDinucleoside PhosphatesHEK293 CellsHumansMiceNucleotidesNucleotidyltransferasesOperonSymbiosisBacterial ProteinscGAS protein, humanCyclic Guanosine Monophosphate-Adenosine Monophosphate SynthaseDinucleoside PhosphatesNucleotidesNucleotidyltransferases

Identifiers

PMID30787435
PMCPMC6544370
OpenAlexW2917815849

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.