Evidence map›Paper›PMID 30787192›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Assembly and cryo-EM structures of RNA-specific measles virus nucleocapsids provide mechanistic insight into paramyxoviral replication.

Ambroise Desfosses, Sigrid Milles, Malene Ringkjøbing Jensen, Serafima Guseva, Jacques-Philippe Colletier, Damien Maurin, Guy Schoehn, Irina Gutsche, Rob W H Ruigrok, Martin Blackledge

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 44 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Ambroise DesfossesCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Sigrid MillesCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Malene Ringkjøbing JensenCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Serafima GusevaCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Jacques-Philippe ColletierCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Damien MaurinCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Guy SchoehnCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France.
Irina GutscheCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France irina.gutsche@ibs.fr rob.ruigrok@ibs.fr martin.blackledge@ibs.fr.
Rob W H RuigrokCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France irina.gutsche@ibs.fr rob.ruigrok@ibs.fr martin.blackledge@ibs.fr.
Martin BlackledgeCommissariat à l'Energie Atomique, Institut de Biologie Structurale, Université Grenoble Alpes, CNRS, 38000 Grenoble, France irina.gutsche@ibs.fr rob.ruigrok@ibs.fr martin.blackledge@ibs.fr.
Institut de Biologie Structurale · FRCentre National de la Recherche Scientifique · FRUniversité Grenoble Alpes · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Assembly of paramyxoviral nucleocapsids on the RNA genome is an essential step in the viral cycle. The structural basis of this process has remained obscure due to the inability to control encapsidation. We used a recently developed approach to assemble measles virus nucleocapsid-like particles on specific sequences of RNA hexamers (poly-Adenine and viral genomic 5') in vitro, and determined their cryoelectron microscopy maps to 3.3-Å resolution. The structures unambiguously determine 5' and 3' binding sites and thereby the binding-register of viral genomic RNA within nucleocapsids. This observation reveals that the 3' end of the genome is largely exposed in fully assembled measles nucleocapsids. In particular, the final three nucleotides of the genome are rendered accessible to the RNA-dependent RNA polymerase complex, possibly enabling efficient RNA processing. The structures also reveal local and global conformational changes in the nucleoprotein upon assembly, in particular involving helix α6 and helix α13 that form edges of the RNA binding groove. Disorder is observed in the bound RNA, localized at one of the two backbone conformational switch sites. The high-resolution structure allowed us to identify putative nucleobase interaction sites in the RNA-binding groove, whose impact on assembly kinetics was measured using real-time NMR. Mutation of one of these sites, R195, whose sidechain stabilizes both backbone and base of a bound nucleic acid, is thereby shown to be essential for nucleocapsid-like particle assembly.

Indexed as

Virus AssemblyBinding SitesCryoelectron MicroscopyGenome, ViralKineticsMagnetic Resonance ImagingMeasles virusModels, MolecularMolecular ConformationNucleocapsidNucleocapsid ProteinsNucleoproteinsParamyxoviridaeRNA, ViralViral ProteinsNucleocapsid Proteinsnucleoprotein, Measles virusNucleoproteinsRNA, ViralViral Proteinsassemblycryoelectron microscopymeasles virusNMRnucleocapsids

Identifiers

PMID30787192
PMCPMC6410849
OpenAlexW2916109690

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.