Evidence map›Paper›PMID 30787178›Full record

ArticleThe Plant cell2019

Regulation of Oxygenic Photosynthesis during Trophic Transitions in the Green Alga

Melissa S Roth, Sean D Gallaher, Daniel J Westcott, Masakazu Iwai, Katherine B Louie, Maria Mueller, Andreas Walter, Fatima Foflonker, Benjamin P Bowen, Nassim N Ataii and 8 more

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 116 citations in OpenAlex.

  1. Trophic Diversity in Duckweed: Mixotrophy, More Than the Sum of its Extremes.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  2. Article
  3. Article
  4. Article
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  11. Article
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  14. Progress towards a targeted biorefinery ofBiomass conversion and biorefinery · 2024
    Review
  15. Green microalgaFrontiers in microbiology · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Quantitative Proteomics ofPlants (Basel, Switzerland) · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors at 4 institutions in 1 country.

Melissa S RothHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102 melissa.s.roth@gmail.com niyogi@berkeley.edu.ORCID 0000-0001-7389-5982
Sean D GallaherDepartment of Chemistry and Biochemistry and Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095-1569.ORCID 0000-0002-9773-6051
Daniel J WestcottHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102.ORCID 0000-0002-1828-2582
Masakazu IwaiHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102.ORCID 0000-0002-0986-9015
Katherine B LouieEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0002-6787-7558
Maria MuellerMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0003-0451-5442
Andreas WalterDepartment of Anatomy, University of California, San Francisco, California 94143.ORCID 0000-0002-4096-1944
Fatima FoflonkerBiology Department, Brookhaven National Laboratory, Upton, New York 11973.ORCID 0000-0002-0472-8192
Benjamin P BowenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0003-1368-3958
Nassim N AtaiiMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0002-8033-8700
Junha SongMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0003-2015-1749
Jian-Hua ChenDepartment of Anatomy, University of California, San Francisco, California 94143.ORCID 0000-0002-7998-0878
Crysten E Blaby-HaasBiology Department, Brookhaven National Laboratory, Upton, New York 11973.ORCID 0000-0002-1583-1291
Carolyn LarabellDepartment of Anatomy, University of California, San Francisco, California 94143.ORCID 0000-0002-6262-4789
Manfred AuerMolecular Biophysics and Integrated Bioimaging Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0002-5435-9436
Trent R NorthenEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, California 94720.ORCID 0000-0001-8404-3259
Sabeeha S MerchantDepartment of Chemistry and Biochemistry and Institute for Genomics and Proteomics, University of California, Los Angeles, California 90095-1569.ORCID 0000-0002-2594-509X
Krishna K NiyogiHoward Hughes Medical Institute, Department of Plant and Microbial Biology, University of California, Berkeley, California 94720-3102 melissa.s.roth@gmail.com niyogi@berkeley.edu.ORCID 0000-0001-7229-2071
Lawrence Berkeley National Laboratory · USHoward Hughes Medical Institute · USBrookhaven National Laboratory · USUniversity of California, Los Angeles · US

Funding

TUBULIN STRUCTURE BY ELECTRON CRYSTALLOGRAPHYP01GM051487 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI DOUDNA, JENNIFER A · 1994 to 2018
$27.6M
TrainingP41GM103445 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LARABELL, CAROLYN A · 2012 to 2019
$8.2M
User Training and OutreachP30GM138441 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LARABELL, CAROLYN A · 2020 to 2023
$3.7M
A Zeiss Elyra S1 Structured Illumination Microscope for the Biological Imaging FaS10OD018136 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI RUZIN, STEVEN EARL · 2014 to 2014
$600k
Howard Hughes Medical InstituteNIGMS NIH HHS P01 GM051487NIGMS NIH HHS P30 GM138441NIGMS NIH HHS P41 GM103445NIH HHS S10 OD018136
6 · The paper itself

Abstract

Light and nutrients are critical regulators of photosynthesis and metabolism in plants and algae. Many algae have the metabolic flexibility to grow photoautotrophically, heterotrophically, or mixotrophically. Here, we describe reversible Glc-dependent repression/activation of oxygenic photosynthesis in the unicellular green alga

Indexed as

AntioxidantsBioengineeringCarbonChlorophyceaeGene Expression Regulation, PlantGlucoseOxygenPhotosynthesisThylakoidsTranscriptomeXanthophyllsAntioxidantsastaxanthineCarbonGlucoseOxygenXanthophylls

Identifiers

PMID30787178
PMCPMC6482638
OpenAlexW2916728423

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.