Evidence map›Paper›PMID 30787151›Full record

ArticleJournal of virology2019

V1 and V2 Domains of HIV Envelope Contribute to CCR5 Antagonist Resistance.

Ellen Wu, Yueqi Du, Xiang Gao, Jie Zhang, John Martin, Makedonka Mitreva, Lee Ratner

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Trial
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Ellen WuDivision of Oncology, Washington University School of Medicine, St. Louis, Missouri, USA.
Yueqi DuDivision of Oncology, Washington University School of Medicine, St. Louis, Missouri, USA.
Xiang GaoDivision of Oncology, Washington University School of Medicine, St. Louis, Missouri, USA.
Jie ZhangDivision of Oncology, Washington University School of Medicine, St. Louis, Missouri, USA.
John MartinMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri, USA.
Makedonka MitrevaMcDonnell Genome Institute, Washington University School of Medicine, St. Louis, Missouri, USA.
Lee RatnerDivision of Oncology, Washington University School of Medicine, St. Louis, Missouri, USA lratner@wustl.edu.
Washington University in St. Louis · USJames S. McDonnell Foundation · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vicriviroc (VCV) is a CCR5 antagonist that blocks the viral entry of CCR5-tropic (R5) virions by binding to and inducing a conformational change in the chemokine receptor. Clinical resistance to CCR5 antagonists occurs in two phases, competitive and noncompetitive stages. In this study, we analyzed two subjects, from a phase 2b VCV clinical trial, whose quasispecies contained R5 and dual-mixed virions at the earliest recorded time of virological failure (VF). Genotypic analysis of R5-tropic patient-derived envelope genes revealed significant changes in the V1/V2 coding domain and convergence toward a more homogenous sequence under VCV therapy. Additionally, a small population of baseline clones sharing similar V1/V2 and V3 domains with the predominant VF isolate was observed. These clones were denoted preresistant based on their genotype. Preresistant clones and chimeric clones containing V1/V2 regions isolated during VF displayed high 50% inhibitory concentration (IC

Indexed as

Anti-HIV AgentsDrug Resistance, Viralenv Gene Products, Human Immunodeficiency VirusHEK293 CellsHIV-1HIV InfectionsHumansPiperazinesProtein DomainsPyrimidinesReceptors, CCR5Virus InternalizationAnti-HIV AgentsCCR5 protein, humanenv Gene Products, Human Immunodeficiency VirusPiperazinesPyrimidinesReceptors, CCR5vicrivirocCCR5CXCR4envelopetropismvicriviroc

Identifiers

PMID30787151
PMCPMC6475789
OpenAlexW2916605906

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.