Evidence map›Paper›PMID 30786885›Full record

ArticleVirology journal2019

Regulation of cyclin T1 during HIV replication and latency establishment in human memory CD4 T cells.

Jacob Couturier, Aaron F Orozco, Hongbing Liu, Sona Budhiraja, Edward B Siwak, Pramod N Nehete, K Jagannadha Sastry, Andrew P Rice, Dorothy E Lewis

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. [Abnormal Activation of T Cells in HIV-1 Infection After Antiretroviral Therapy].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2023
    Article
  3. Article
  4. Article
  5. Aptamers for Anti-Viral Therapeutics and Diagnostics.International journal of molecular sciences · 2021
    Review
  6. Review
  7. Review
  8. Article
  9. Proteasomal Inhibition Potentiates Latent HIV Reactivation.AIDS research and human retroviruses · 2020
    Article
  10. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Jacob CouturierDivision of Infectious Diseases, Department of Internal Medicine, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Aaron F OrozcoDivision of Infectious Diseases, Department of Internal Medicine, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA.
Hongbing LiuDepartment of Molecular Virology & Microbiology, Baylor College of Medicine, Houston, TX, USA.
Sona BudhirajaDepartment of Molecular Virology & Microbiology, Baylor College of Medicine, Houston, TX, USA.
Edward B SiwakDepartment of Molecular Virology & Microbiology, Baylor College of Medicine, Houston, TX, USA.
Pramod N NeheteDepartment of Veterinary Sciences, The University of Texas MD Anderson Cancer Center, Bastrop, TX, USA.
K Jagannadha SastryDepartment of Immunology, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Andrew P RiceDepartment of Molecular Virology & Microbiology, Baylor College of Medicine, Houston, TX, USA.
Dorothy E LewisDivision of Infectious Diseases, Department of Internal Medicine, University of Texas Health Science Center at Houston, Houston, TX, 77030, USA. Dorothy.E.Lewis@uth.tmc.edu.
Baylor College of Medicine · USThe University of Texas Health Science Center at Houston · USThe University of Texas MD Anderson Cancer Center · US

Funding

Virology CoreP30AI036211 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI BUTEL, JANET S · 1994 to 2015
$21.7M
NIAID NIH HHS P30 AI036211
6 · The paper itself

Abstract

backgroundThe regulatory cyclin, Cyclin T1 (CycT1), is a host factor essential for HIV-1 replication in CD4 T cells and macrophages. The importance of CycT1 and the Positive Transcription Elongation Factor b (P-TEFb) complex for HIV replication is well-established, but regulation of CycT1 expression and protein levels during HIV replication and latency establishment in CD4 T cells is less characterized.

methodsTo better define the regulation of CycT1 levels during HIV replication in CD4 T cells, multiparameter flow cytometry was utilized to study the interaction between HIV replication (intracellular p24) and CycT1 of human peripheral blood memory CD4 T cells infected with HIV in vitro. CycT1 was further examined in CD4 T cells of human lymph nodes.

resultsIn activated (CD3+CD28 costimulation) uninfected blood memory CD4 T cells, CycT1 was most significantly upregulated in maximally activated (CD69+CD25+ and HLA.DR+CD38+) cells. In memory CD4 T cells infected with HIV in vitro, two distinct infected populations of p24+CycT1+ and p24+CycT1- cells were observed during 7 days infection, suggestive of different phases of productive HIV replication and subsequent latency establishment. Intriguingly, p24+CycT1- cells were the predominant infected population in activated CD4 T cells, raising the possibility that productively infected cells may transition into latency subsequent to CycT1 downregulation. Additionally, when comparing infected p24+ cells to bystander uninfected p24- cells (after bulk HIV infections), HIV replication significantly increased T cell activation (CD69, CD25, HLA.DR, CD38, and Ki67) without concomitantly increasing CycT1 protein levels, possibly due to hijacking of P-TEFb by the viral Tat protein. Lastly, CycT1 was constitutively expressed at higher levels in lymph node CD4 T cells compared to blood T cells, potentially enhancing latency generation in lymphoid tissues.

conclusionsCycT1 is most highly upregulated in maximally activated memory CD4 T cells as expected, but may become less associated with T cell activation during HIV replication. The progression into latency may further be predicated by substantial generation of p24+CycT1- cells during HIV replication.

Indexed as

CD4-Positive T-LymphocytesCyclin TFlow CytometryGene Expression RegulationHIV-1HIV InfectionsHost Microbial InteractionsHumansPositive Transcriptional Elongation Factor BTranscriptional ActivationVirus LatencyVirus ReplicationCCNT1 protein, humanCyclin TPositive Transcriptional Elongation Factor BCyclin T1Flow cytometryHIV latencyHIV replicationHIV reservoirsMemory CD4 T cellsP-TEFb

Identifiers

PMID30786885
PMCPMC6381639
OpenAlexW2925314448

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.