Evidence map›Paper›PMID 30786881›Full record

ArticleBMC genomics2019

Transcriptomic analysis reveals protein homeostasis breakdown in the coral Acropora millepora during hypo-saline stress.

Catalina Aguilar, Jean-Baptiste Raina, Sylvain Fôret, David C Hayward, Bruno Lapeyre, David G Bourne, David J Miller

Abstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  4. Transcriptomic insights into the low-salinity tolerance of the sea louse Caligus elongatus.Journal of comparative physiology. B, Biochemical, systemic, and environmental physiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Catalina AguilarAIMS@JCU and Department of Molecular and Cell Biology, James Cook University, Townsville, Queensland, 4811, Australia.
Jean-Baptiste RainaAIMS@JCU and Department of Molecular and Cell Biology, James Cook University, Townsville, Queensland, 4811, Australia.
Sylvain FôretARC Centre of Excellence for Coral Reef Studies and Department of Molecular and Cell Biology, James Cook University, Townsville, Queensland, 4811, Australia.
David C HaywardDivision of Ecology and Evolution, Research School of Biology, Australian National University, Canberra, ACT, 2601, Australia.
Bruno LapeyreLaboratoire d'excellence CORAIL, Centre de Recherches Insulaires et Observatoire de l'Environnement (CRIOBE), Moorea, B.P.1013, Papeete, French Polynesia.
David G BourneAIMS@JCU and Department of Molecular and Cell Biology, James Cook University, Townsville, Queensland, 4811, Australia.
David J MillerAIMS@JCU and Department of Molecular and Cell Biology, James Cook University, Townsville, Queensland, 4811, Australia. david.miller@jcu.edu.au.

Funding

Centre of Excellence for Coral Reef Studies, Australian Research Council CE14100020
6 · The paper itself

Abstract

backgroundCoral reefs can experience salinity fluctuations due to rainfall and runoff; these events can have major impacts on the corals and lead to bleaching and mortality. On the Great Barrier Reef (GBR), low salinity events, which occur during summer seasons and can involve salinity dropping ~ 10 PSU correlate with declines in coral cover, and these events are predicted to increase in frequency and severity under future climate change scenarios. In other marine invertebrates, exposure to low salinity causes increased expression of genes involved in proteolysis, responses to oxidative stress, and membrane transport, but the effects that changes in salinity have on corals have so far received only limited attention. To better understand the coral response to hypo-osmotic stress, here we investigated the transcriptomic response of the coral Acropora millepora in both adult and juvenile life stages to acute (1 h) and more prolonged (24 h) exposure to low salinity.

resultsDifferential gene expression analysis revealed the involvement of both common and specific response mechanisms in Acropora. The general response to environmental stressors included up-regulation of genes involved in the mitigation of macromolecular and oxidative damage, while up-regulation of genes involved in amino acid metabolism and transport represent specific responses to salinity stress.

conclusionsThis study is the first comprehensive transcriptomic analysis of the coral response to low salinity stress and provides important insights into the likely consequences of heavy rainfall and runoff events on coral reefs.

Indexed as

Gene Expression ProfilingProteostasisSalinityTranscriptomeAmino AcidsAnimalsAnthozoaComputational BiologyEndoplasmic ReticulumGene Expression RegulationGene OntologyOxidative StressProteolysisStress, PhysiologicalAmino AcidsAmino acid metabolismCoralEndoplasmic reticulumSalinity stressTranscriptomics

Identifiers

PMID30786881
PMCPMC6381741

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.