Evidence map›Paper›PMID 30783952›Full record

ArticlePlant molecular biology2019

The C-terminal WD40 repeats on the TOPLESS co-repressor function as a protein-protein interaction surface.

Joe Collins, Kevin O'Grady, Sixue Chen, William Gurley

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. CONSERVATION AND DIVERGENCE WITHIN THEbioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. RhizogenicProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. TOPLESS in the regulation of plant immunity.Plant molecular biology · 2022
    Review
  14. Article
  15. Review
  16. Article
  17. TEM1 combinatorially binds toProceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  18. Repression by theeLife · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Joe CollinsPlant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, USA.
Kevin O'GradyHorticultural Sciences Department, University of Florida, Gainesville, FL, USA.
Sixue ChenPlant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, USA.
William GurleyPlant Molecular and Cellular Biology Program, University of Florida, Gainesville, FL, USA. wgurley@ufl.edu.
University of Florida · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageThe two predicted WD40 propellers on TOPLESS function as protein-protein interaction domains. The 1st WD40 propeller mediates interaction with RAV1, and the 2nd WD40 propeller mediates interaction with VRN5. The TOPLESS/TOPLESS-RELATED (TPL/TPR) co-repressor family proteins are known to interact with a wide variety of proteins including transcription factors, Mediator subunits, histone deacetylases, and histone tails. Through these interactions, TPL/TPR act to repress transcription in an increasingly diverse array of plant pathways. Proteins that bind TPL/TPR typically contain one or more Repression Domains (RDs) that mediate the interaction. For example, the well-characterized Ethylene response factor-associated Amphiphilic Repression (EAR) motif is known to facilitate interaction by binding the TOPLESS Domain (TPD) located in the N-terminus. Here we show that in yeast two-hybrid assays, the non-EAR protein, Related to ABI3/VP1-1 (RAV1), binds a novel region located within the first nine WD40-repeats of TPL. Protein modeling and in silico analysis suggest that these nine WD40 repeats may form the first of two WD40 propellers located on C-terminus of TPL. The interaction between RAV1 and the 1st WD40 propeller is conserved with another RAV family member, TEMPRANILLO1 (TEM1) and is mediated by the B3 Repression Domain (BRD) located on both RAV1 and TEM1. Also, the predicted 2nd WD40 propeller was shown in yeast cells to bind Vernalization 5 (VRN5), which contains several unconfirmed partial RDs. Furthermore, we demonstrate that the 1st WD40 propeller of TPL can form a complex with RAV1 both in yeast and in Arabidopsis protoplasts.

Indexed as

WD40 RepeatsArabidopsisArabidopsis ProteinsCo-Repressor ProteinsModels, BiologicalProtein BindingProtoplastsStructure-Activity RelationshipArabidopsis ProteinsAt1g15750 protein, ArabidopsisCo-Repressor ProteinsRAV1TOPLESSVRN5WD40

Identifiers

PMID30783952
OpenAlexW2916589200

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.