Evidence map›Paper›PMID 30779749›Full record

ArticlePloS one2019

The genetic intractability of Symbiodinium microadriaticum to standard algal transformation methods.

Jit Ern Chen, Adrian C Barbrook, Guoxin Cui, Christopher J Howe, Manuel Aranda

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 3 countries.

Jit Ern ChenRed Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0003-4779-7275
Adrian C BarbrookDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Guoxin CuiRed Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0003-4951-1883
Christopher J HoweDepartment of Biochemistry, University of Cambridge, Cambridge, United Kingdom.
Manuel ArandaRed Sea Research Center, King Abdullah University of Science and Technology (KAUST), Thuwal, Saudi Arabia.ORCID 0000-0001-6673-016X
King Abdullah University of Science and Technology · SAUniversity of Cambridge · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Modern transformation and genome editing techniques have shown great success across a broad variety of organisms. However, no study of successfully applied genome editing has been reported in a dinoflagellate despite the first genetic transformation of Symbiodinium being published about 20 years ago. Using an array of different available transformation techniques, we attempted to transform Symbiodinium microadriaticum (CCMP2467), a dinoflagellate symbiont of reef-building corals, with the view to performing subsequent CRISPR-Cas9 mediated genome editing. Plasmid vectors designed for nuclear transformation containing the chloramphenicol resistance gene under the control of the CaMV p35S promoter as well as several putative endogenous promoters were used to test a variety of transformation techniques including biolistics, electroporation and agitation with silicon carbide whiskers. Chloroplast-targeted transformation was attempted using an engineered Symbiodinium chloroplast minicircle encoding a modified PsbA protein expected to confer atrazine resistance. We report that we have been unable to confer chloramphenicol or atrazine resistance on Symbiodinium microadriaticum strain CCMP2467.

Indexed as

Transformation, GeneticAnimalsAnthozoaAtrazineCell NucleusChloramphenicolChloroplast ProteinsChloroplastsDinoflagellidaDrug ResistanceAtrazineChloramphenicolChloroplast Proteins

Identifiers

PMID30779749
PMCPMC6380556
OpenAlexW2950160638

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.