Evidence map›Paper›PMID 30779694›Full record

ArticleRadiation research2019

Automated Triage Radiation Biodosimetry: Integrating Imaging Flow Cytometry with High-Throughput Robotics to Perform the Cytokinesis-Block Micronucleus Assay.

Qi Wang, Matthew A Rodrigues, Mikhail Repin, Sergey Pampou, Lindsay A Beaton-Green, Jay Perrier, Guy Garty, David J Brenner, Helen C Turner, Ruth C Wilkins

Open access · bronzeAbstract read
In one paragraph

Article in Radiation research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.7field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Development of high-throughput systems for biodosimetry.Radiation protection dosimetry · 2023
    Article
  7. Establishment ofHeliyon · 2023
    Article
  8. Review
  9. The NIAID/RNCP Biodosimetry Program: An Overview.Cytogenetic and genome research · 2023
    Review
  10. The Imaging Flow Cytometry-Based Cytokinesis-Block MicroNucleus (CBMN) Assay.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. VADER: a variable dose-rate externalScientific reports · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Qi Wanga Center for Radiological Research, Columbia University Medical Center, New York, New York 10032.
Matthew A Rodriguesc MilliporeSigma, Seattle, Washington, 98119.
Mikhail Repina Center for Radiological Research, Columbia University Medical Center, New York, New York 10032.
Sergey Pampoub Columbia Genome Center High-Throughput Screening Facility, Columbia University Medical Center, New York, New York 10032.
Lindsay A Beaton-Greend Consumer and Clinical Radiation Protection Bureau, Health Canada, Ottawa K1A 1C1, Canada.
Jay Perriera Center for Radiological Research, Columbia University Medical Center, New York, New York 10032.
Guy Gartya Center for Radiological Research, Columbia University Medical Center, New York, New York 10032.
David J Brennera Center for Radiological Research, Columbia University Medical Center, New York, New York 10032.
Helen C Turnera Center for Radiological Research, Columbia University Medical Center, New York, New York 10032.
Ruth C Wilkinsd Consumer and Clinical Radiation Protection Bureau, Health Canada, Ottawa K1A 1C1, Canada.
Medical Radiological Research Center · RUHealth Canada · CAHigh Throughput Biology (United States) · USMilliman (United States) · US

Funding

Sample Engineering CoreU19AI067773 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI FORNACE, ALBERT J · 2005 to 2024
$105.4M
NIAID NIH HHS U19 AI067773
6 · The paper itself

Abstract

The cytokinesis-block micronucleus (CBMN) assay has become a fully-validated and standardized method for radiation biodosimetry. The assay is typically performed using microscopy, which is labor intensive, time consuming and impractical after a large-scale radiological/nuclear event. Imaging flow cytometry (IFC), which combines the statistical power of traditional flow cytometry with the sensitivity and specificity of microscopy, has been recently used to perform the CBMN assay. Since this technology is capable of automated sample acquisition and multi-file analysis, we have integrated IFC into our Rapid Automated Biodosimetry Technology (RABiT-II). Assay development and optimization studies were designed to increase the yield of binucleated cells (BNCs), and improve data acquisition and analysis templates to increase the speed and accuracy of image analysis. Human peripheral blood samples were exposed ex vivo with up to 4 Gy of c rays at a dose rate of 0.73 Gy/min. After irradiation, samples were transferred to microtubes (total volume of 1 ml including blood and media) and organized into a standard 8 × 12 plate format. Sample processing methods were modified by increasing the blood-to-media ratio, adding hypotonic solution prior to cell fixation and optimizing nuclear DRAQ5 staining, leading to an increase of 81% in BNC yield. Modification of the imaging processing algorithms within IFC software also improved BNC and MN identification, and reduced the average time of image analysis by 78%. Finally, 50 ll of irradiated whole blood was cultured with 200 ll of media in 96-well plates. All sample processing steps were performed automatically using the RABiT-II cell: :explorer robotic system adopting the optimized IFC-CBMN assay protocol. The results presented here detail a novel, high-throughput RABiT-IFC CBMN assay that possesses the potential to increase capacity for triage biodosimetry during a large-scale radiological/nuclear event.

Indexed as

Flow CytometryMicronucleus TestsRoboticsTriageAdultAutomationCalibrationCytokinesisDose-Response Relationship, RadiationFemaleHumansMaleMiddle AgedRadiometry

Identifiers

PMID30779694
PMCPMC6483078
OpenAlexW2935373262

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.