Evidence map›Paper›PMID 30778836›Full record

ArticleJournal of molecular neuroscience : MN2019

NF1 Somatic Mutation in Dystrophic Scoliosis.

Rebecca L Margraf, Chad VanSant-Webb, Rong Mao, David H Viskochil, John Carey, Heather Hanson, Jacques D'Astous, Allie Grossmann, David A Stevenson

Abstract readCase Reports
PubMed Publisher
In one paragraph

Article in Journal of molecular neuroscience : MN, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Molecular Dissection of Somatic Skeletal Disease in Neurofibromatosis Type 1.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2023
    Article
  6. Article
  7. Somatic Double Inactivation ofHuman mutation · 2023
    Article
  8. Identifying Bone Matrix Impairments in a Mouse Model of Neurofibromatosis Type 1 (NF1) by Clinically Translatable Techniques.Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research · 2022
    Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. A molecular basis for neurofibroma-associated skeletal manifestations in NF1.Genetics in medicine : official journal of the American College of Medical Genetics · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Rebecca L MargrafARUP Institute for Clinical and Experimental Pathology, ARUP Laboratories, Salt Lake City, UT, USA.ORCID http://orcid.org/0000-0001-7355-2621
Chad VanSant-WebbARUP Institute for Clinical and Experimental Pathology, ARUP Laboratories, Salt Lake City, UT, USA.
Rong MaoARUP Institute for Clinical and Experimental Pathology, ARUP Laboratories, Salt Lake City, UT, USA.
David H ViskochilDepartment of Pediatrics, Division of Medical Genetics, School of Medicine, University of Utah, Salt Lake City, UT, USA.
John CareyDepartment of Pediatrics, Division of Medical Genetics, School of Medicine, University of Utah, Salt Lake City, UT, USA.
Heather HansonDepartment of Pediatrics, Division of Medical Genetics, School of Medicine, University of Utah, Salt Lake City, UT, USA.
Jacques D'AstousShriners Hospital for Children, Salt Lake City, UT, USA.
Allie GrossmannDepartment of Pathology, School of Medicine, University of Utah, Salt Lake City, UT, USA.
David A StevensonDepartment of Pediatrics, Division of Medical Genetics, Stanford University, 300 Pasteur Dr., H315, Stanford, CA, 94305, USA. dasteven@stanford.edu.
University of Utah · USARUP Institute for Clinical and Experimental PathologyStanford University · US

Funding

UNIVERSITY OF UTAH CENTER FOR CLINICAL AND TRANSLATIONAL SCIENCE-UL1: BPCAUL1RR025764 · NCRR · UNIVERSITY OF UTAH · PI MCCLAIN, DONALD A. · 2008 to 2011
$19.4M
National Center for Research Resources UL1RR025764Shriners Hospitals for Children 9198university of utah clinical genetics research program N/AU.S. Department of Defense W81XWH-11-1-250
6 · The paper itself

Abstract

Scoliosis is a common manifestation of neurofibromatosis type 1, causing significant morbidity. The etiology of dystrophic scoliosis in neurofibromatosis type 1 is not fully understood and therapies are lacking. Somatic mutations in NF1 have been shown in tibial pseudarthrosis providing rationale for similar processes in neurofibromatosis type 1-associated dystrophic scoliosis. Spinal samples from surgical procedures with matched peripheral blood of two individuals with neurofibromatosis type 1 and dystrophic scoliosis were obtained and DNA extracted. Next generation sequencing of various spinal sections as well as the germline/blood sample were performed using a RASopathy gene panel (includes the NF1 gene). Variants were compared between the spinal tissue samples and the germline data. In addition, the next generation sequencing allele frequency data were used to detect somatic loss of heterozygosity. All samples had a detected potentially inactivating NF1 germline mutation. Both individuals demonstrated an allelic imbalance inclusive of NF1 in the next generation sequencing data. In addition, for the same two individuals, there was an increase in the % variant reads for the germline mutation in some of the surgical spinal samples corresponding to the allelic imbalance. Contra analysis did not show any deletion in Chromosome 17 next generation sequencing data. Microarray analysis verified somatic copy neutral loss of heterozygosity for these two individuals for the majority of the chromosome 17 q-arm, inclusive of the NF1 gene. These results suggest that the cause of dystrophic scoliosis is multifactorial and that a somatic NF1 mutation contributes to the etiology.

Indexed as

ChildFemaleGene FrequencyHumansLoss of HeterozygosityMaleMutationNeurofibromatosis 1Neurofibromin 1ScoliosisSpineNeurofibromin 1NF1 protein, humanNeurofibromatosis type 1NF1ScoliosisSomatic mutationSpine

Identifiers

PMID30778836
OpenAlexW2916247281

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.