Evidence map›Paper›PMID 30777481›Full record

ReviewRNA biology2021

La proteins couple use of sequence-specific and non-specific binding modes to engage RNA substrates.

Mark A Bayfield, Jyotsna Vinayak, Kyra Kerkhofs, Farnaz Mansouri-Noori

Open access · bronzeAbstract readReview
In one paragraph

Review in RNA biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. The regulation, function and disease relevance of cytoplasmic tRNAs.Nature reviews. Molecular cell biology · 2026
    Review
  3. Article
  4. Article
  5. Structure ofRNA biology · 2021
    Article
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mark A BayfieldDepartment of Biology, York University, Toronto, Ontario, Canada.ORCID 0000-0002-8971-7598
Jyotsna VinayakDepartment of Biology, York University, Toronto, Ontario, Canada.
Kyra KerkhofsDepartment of Biology, York University, Toronto, Ontario, Canada.
Farnaz Mansouri-NooriDepartment of Biology, York University, Toronto, Ontario, Canada.
York University · CA

Funding

CIHR
6 · The paper itself

Abstract

La shuttles between the nucleus and cytoplasm where it binds nascent RNA polymerase III (pol III) transcripts and mRNAs, respectively. La protects the 3' end of pol III transcribed RNA precursors, such as pre-tRNAs, through the use of a well-characterized UUU-3'OH binding mode. La proteins are also RNA chaperones, and La-dependent RNA chaperone activity is hypothesized to promote pre-tRNA maturation and translation at cellular and viral internal ribosome entry sites via binding sites distinct from those used for UUU-3'OH recognition. Since the publication of La-UUU-3'OH co-crystal structures, biochemical and genetic experiments have expanded our understanding of how La proteins use UUU-3'OH-independent binding modes to make sequence-independent contacts that can increase affinity for ligands and promote RNA remodeling. Other recent work has also expanded our understanding of how La binds mRNAs through contacts to the poly(A) tail. In this review, we focus on advances in the study of La protein-RNA complex surfaces beyond the description of the La-UUU-3'OH binding mode. We highlight recent advances in the functions of expected canonical nucleic acid interaction surfaces, a heightened appreciation of disordered C-terminal regions, and the nature of sequence-independent RNA determinants in La-RNA target binding. We further discuss how these RNA binding modes may have relevance to the function of the La-related proteins.

Indexed as

Binding SitesProtein Interaction Domains and MotifsAnimalsAutoantigensHumansNucleic Acid ConformationPoly AProtein BindingRibonucleoproteinsRibonucleoside Diphosphate ReductaseRNARNA-Binding ProteinsRNA CleavageSS-B AntigenStructure-Activity RelationshipSubstrate SpecificityAutoantigensPoly ARibonucleoproteinsRibonucleoside Diphosphate Reductaseribonucleotide reductase M2RNARNA-Binding ProteinsRRM1 protein, humanSS-B AntigenLa proteinLa –related proteinprecursor tRNAprotein domainRNA binding proteinRNA chaperoneRNA processingRNA-protein interactiontranslational control

Identifiers

PMID30777481
PMCPMC7928037
OpenAlexW2917317549

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.