Evidence map›Paper›PMID 30777173›Full record

ReviewMethods in cell biology2019

The painted sea urchin, Lytechinus pictus, as a genetically-enabled developmental model.

Katherine T Nesbit, Travis Fleming, Grant Batzel, Amara Pouv, Hannah D Rosenblatt, Douglas A Pace, Amro Hamdoun, Deirdre C Lyons

Abstract readReview
In one paragraph

Review in Methods in cell biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Cryopreservation of sea urchin (Lytechinus pictus) embryos and development through metamorphosis.Developmental dynamics : an official publication of the American Association of Anatomists · 2026
    Article
  2. The tuxedo sea urchinbioRxiv : the preprint server for biology · 2026
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Cold storage and cryopreservation methods for spermatozoa of the sea urchins Lytechinus pictus and Strongylocentrotus purpuratus.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
    Article
  9. Article
  10. The roles of ABCB1/P-glycoprotein drug transporters in regulating gut microbes and inflammation: insights from animal models, old and new.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
  11. Semi-automated, high-content imaging of drug transporter knockout sea urchin (Lytechinus pictus) embryos.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2024
    Article
  12. Future research directions of the model marine tubeworm Hydroides elegans and synthesis of developmental staging of the complete life cycle.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Article
  13. Article
  14. Article
  15. Embryo, larval, and juvenile staging of Lytechinus pictus from fertilization through sexual maturation.Developmental dynamics : an official publication of the American Association of Anatomists · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Katherine T NesbitMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, United States.
Travis FlemingMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, United States.
Grant BatzelMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, United States.
Amara PouvBiological Science, California State University Long Beach, Long Beach, CA, United States.
Hannah D RosenblattMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, United States.
Douglas A PaceBiological Science, California State University Long Beach, Long Beach, CA, United States.
Amro HamdounMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, United States. Electronic address: ahamdoun@ucsd.edu.
Deirdre C LyonsMarine Biology Research Division, Scripps Institution of Oceanography, University of California, San Diego, La Jolla, CA, United States. Electronic address: d1lyons@ucsd.edu.

Funding

Identity, mechanisms and early life impacts of transporter interfering compoundsR01ES027921 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHANG, GEOFFREY A, HAMDOUN, AMRO M · 2018 to 2022
$3.0M
Molecular Mechanisms of Marine Organohalogen Bioaccumulation and NeurotoxicityR01ES030318 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMDOUN, AMRO M, PESSAH, ISAAC N · 2018 to 2022
$826k
NIEHS NIH HHS R01 ES027921NIEHS NIH HHS R01 ES030318
6 · The paper itself

Abstract

Although sea urchins are one of the oldest and most widely used marine model systems, few species have been routinely kept in culture through multiple generations. The workhorse of the field is the purple urchin Strongylocentrotus purpuratus. However, one disadvantage of S. purpuratus is its long generation time, making it impractical as a model for generating and maintaining transgenic lines. In an effort to develop a sea urchin that is suitable for transgenerational experiments and the generation of transgenic lines, we have focused on development of updated culturing methods and genomic resources for the painted sea urchin, Lytechinus pictus. Compared to S. purpuratus, L. pictus have relatively large eggs, develop into optically clear embryos, and the smaller adults can become gravid in under a year. Fifty years ago, Hinegardner developed culturing methods for raising L. pictus through metamorphosis. Here, we provide an updated protocol for establishing and maintaining L. pictus in the laboratory, and describe a new genome resource for this urchin. In our hands, L. pictus reach the 4-armed pluteus stage at 4 days; become competent to metamorphosis at 24 days; and are gravid by 6 months. Plutei and juveniles are fed on a diet of algae and diatoms, and adults are fed on kelp. We also make available a L. pictus transcriptome generated from developmental stages (eggs to 2-day-old plutei) to support the annotation of our genome sequencing project, and to enhance the utility of this species for molecular studies and transgenesis.

Indexed as

AnimalsAnimals, Genetically ModifiedEmbryo, NonmammalianGenomeLytechinusModels, AnimalSea UrchinsTranscriptomeWhole Genome SequencingCultureDevelopmental transcriptomeLytechinus pictusTransgenic lines

Identifiers

PMID30777173
PMCPMC6487866

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.