Evidence map›Paper›PMID 30776175›Full record

ArticleCancer science2019

Somatic alterations of TP53, ERBB2, PIK3CA and CCND1 are associated with chemosensitivity for breast cancers.

Libo Yang, Feng Ye, Longlong Bao, Xiaoyan Zhou, Zhe Wang, Peizhen Hu, Nengtai Ouyang, Xiaojuan Li, Yi Shi, Gang Chen and 9 more

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 1 synthesis or guideline pooled it, 46 citations in OpenAlex.

  1. Pooled it
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  3. Article
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  5. Investigation ofHeliyon · 2024
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  10. European journal of breast health · 2023
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  13. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 11 institutions in 1 country.

Libo YangDepartment of Pathology, West China Hospital of Sichuan University, Chengdu, China.
Feng YeLaboratory of Pathology, West China Hospital of Sichuan University, Chengdu, China.
Longlong BaoDepartment of Pathology, Shanghai Cancer Center, Fudan University, Shanghai, China.
Xiaoyan ZhouDepartment of Pathology, Shanghai Cancer Center, Fudan University, Shanghai, China.
Zhe WangDepartment of Pathology, Xijing Hospital and School of Basic Medicine, Air Force Medical University, Xi'an, China.
Peizhen HuDepartment of Pathology, Xijing Hospital and School of Basic Medicine, Air Force Medical University, Xi'an, China.
Nengtai OuyangCellular & Molecular Diagnostics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Xiaojuan LiCellular & Molecular Diagnostics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, China.
Yi ShiDepartment of Molecular Pathology, Fujian Cancer Hospital, Fujian Medical University Cancer Hospital, Fuzhou, China.
Gang ChenDepartment of Molecular Pathology, Fujian Cancer Hospital, Fujian Medical University Cancer Hospital, Fuzhou, China.
Peiyi XiaDepartment of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Meiying ChuiDepartment of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Wencai LiDepartment of Pathology, The First Affiliated Hospital of Zhengzhou University, Zhengzhou, China.
Ying JiaDepartment of Pathology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
Yueping LiuDepartment of Pathology, The Fourth Hospital of Hebei Medical University, Shijiazhuang, China.
Junjun LiuBurning Rock Biotech, Guangzhou, China.
Junyi YeBurning Rock Biotech, Guangzhou, China.
Zhe ZhangBurning Rock Biotech, Guangzhou, China.
Hong BuDepartment of Pathology, West China Hospital of Sichuan University, Chengdu, China.
Burning Rock Biotech (China) · CNFujian Medical University · CNHebei Medical University · CNSun Yat-sen Memorial Hospital · CNWest China Hospital of Sichuan University · CNXijing Hospital · CNZhengzhou University · CNFirst Affiliated Hospital of Zhengzhou University · CNFudan University · CNShanghai Medical College of Fudan University · CNSichuan University · CN

Funding

1.3.5 Project for Disciplines of Excellence, West China Hospital, Sichuan University ZYGD18012Fujian Provincial Science and Technology Department Planning Project 2018Y2003Research Supporting Project from Science and Technology Department of Sichuan Province 2017SZ0005
6 · The paper itself

Abstract

The correlation of genetic alterations with response to neoadjuvant chemotherapy (NAC) has not been fully revealed. In this study, we enrolled 247 breast cancer patients receiving anthracycline-taxane-based NAC treatment. A next generation sequencing (NGS) panel containing 36 hotspot breast cancer-related genes was used in this study. Two different standards for the extent of pathologic complete response (pCR), ypT0/isypN0 and ypT0/is, were used as indicators for NAC treatment. TP53 mutation (n = 149, 60.3%), PIK3CA mutation (n = 109, 44.1%) and MYC amplification (n = 95, 38.5%) were frequently detected in enrolled cases. TP53 mutation (P = 0.019 for ypT0/isypN0 and P = 0.003 for ypT0/is) and ERBB2 amplification (P < 0.001 for both ypT0/isypN0 and ypT0/is) were related to higher pCR rates. PIK3CA mutation (P = 0.040 for ypT0/isypN0) and CCND2 amplification (P = 0.042 for ypT0/is) showed reduced sensitivity to NAC. Patients with MAPK pathway alteration had low pCR rates (P = 0.043 for ypT0/is). Patients with TP53 mutation (-) PIK3CA mutation (-) ERBB2 amplification (+) CCND1 amplification (-), TP53 mutation (+) PIK3CA mutation (-) ERBB2 amplification (+) CCND1 amplification (-) or TP53 mutation (+) PIK3CA mutation (+) ERBB2 amplification (+) CCND1 amplification (-)had significantly higher pCR rates (P < 0.05 for ypT0/isypN0 and ypT0/is) than wild type genotype tumors. Some cancer genetic alterations as well as pathway alterations were associated with chemosensitivity to NAC treatment. Our study may shed light on the molecular characteristics of breast cancer for prediction of NAC expectations when breast cancer is first diagnosed by biopsy.

Indexed as

Genetic VariationAdultAgedAntineoplastic AgentsAntineoplastic Combined Chemotherapy ProtocolsBiomarkers, TumorBreast NeoplasmsCell Line, TumorClass I Phosphatidylinositol 3-KinasesCyclin D1Drug Resistance, NeoplasmErb-b2 Receptor Tyrosine KinasesFemaleGene AmplificationHigh-Throughput Nucleotide SequencingHumansAntineoplastic AgentsBiomarkers, TumorCCND1 protein, humanClass I Phosphatidylinositol 3-KinasesCyclin D1ERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesPIK3CA protein, humanTumor Suppressor Protein p53breast neoplasmgenetic variationhigh-throughput nucleotide sequencingneoadjuvant therapypathologic complete response

Identifiers

PMID30776175
PMCPMC6447848
OpenAlexW2915766093

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.