Evidence map›Paper›PMID 30774881›Full record

ArticleChemical science2019

Syntheses of defined sulfated oligohyaluronans reveal structural effects, diversity and thermodynamics of GAG-protein binding.

Sebastian Köhling, Joanna Blaszkiewicz, Gloria Ruiz-Gómez, María Isabel Fernández-Bachiller, Katharina Lemmnitzer, Nydia Panitz, Annette G Beck-Sickinger, Jürgen Schiller, M Teresa Pisabarro, Jörg Rademann

Open access · diamondAbstract read
In one paragraph

Article in Chemical science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Glycosaminoglycans as Polyelectrolytes: Charge, Interactions, and Applications.Chembiochem : a European journal of chemical biology · 2025
    Review
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  11. Article
  12. IR action spectroscopy of glycosaminoglycan oligosaccharides.Analytical and bioanalytical chemistry · 2020
    Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Sebastian KöhlingInstitute of Pharmacy - Medicinal Chemistry , Freie Universität Berlin , Königin-Luise-Str. 2+4 , 14195 Berlin , Germany . Email: joerg.rademann@fu-berlin.de.
Joanna BlaszkiewiczInstitute of Pharmacy - Medicinal Chemistry , Freie Universität Berlin , Königin-Luise-Str. 2+4 , 14195 Berlin , Germany . Email: joerg.rademann@fu-berlin.de.
Gloria Ruiz-GómezStructural Bioinformatics , BIOTEC TU Dresden , Tatzberg 47-51 , Dresden 01307 , Germany . Email: maria_teresa.pisabarro@tu-dresden.de.
María Isabel Fernández-BachillerInstitute of Pharmacy - Medicinal Chemistry , Freie Universität Berlin , Königin-Luise-Str. 2+4 , 14195 Berlin , Germany . Email: joerg.rademann@fu-berlin.de.
Katharina LemmnitzerInstitute of Medical Physics and Biophysics , University of Leipzig , Härtelstr. 16/18 , 04107 Leipzig , Germany.
Nydia PanitzInstitute of Biochemistry , University of Leipzig , Brüderstr. 34 , 04103 Leipzig , Germany.
Annette G Beck-SickingerInstitute of Biochemistry , University of Leipzig , Brüderstr. 34 , 04103 Leipzig , Germany.
Jürgen SchillerInstitute of Medical Physics and Biophysics , University of Leipzig , Härtelstr. 16/18 , 04107 Leipzig , Germany.ORCID 0000-0002-4328-8652
M Teresa PisabarroStructural Bioinformatics , BIOTEC TU Dresden , Tatzberg 47-51 , Dresden 01307 , Germany . Email: maria_teresa.pisabarro@tu-dresden.de.
Jörg RademannInstitute of Pharmacy - Medicinal Chemistry , Freie Universität Berlin , Königin-Luise-Str. 2+4 , 14195 Berlin , Germany . Email: joerg.rademann@fu-berlin.de.ORCID 0000-0001-6678-3165
Medicina · PLInstitute of Biophysics · BGLeipzig University · DETechnische Universität Dresden · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Binding of sulfated glycosaminoglycans (GAG) to a wide spectrum of extracellular regulatory proteins is crucial for physiological processes such as cell growth, migration, tissue homeostasis and repair. Thus, GAG derivatives exhibit great relevance in the development of innovative biomaterials for tissue regeneration therapies. We present a synthetic strategy for the preparation of libraries of defined sulfated oligohyaluronans as model GAG systematically varied in length, sulfation pattern and anomeric substitution in order to elucidate the effects of these parameters on GAG recognition by regulatory proteins. Through an experimental and computational approach using fluorescence polarization, ITC, docking and molecular dynamics simulations we investigate the binding of these functionalized GAG derivatives to ten representative regulatory proteins including IL-8, IL-10, BMP-2, sclerostin, TIMP-3, CXCL-12, TGF-β, FGF-1, FGF-2, and AT-III, and we establish structure-activity relationships for GAG recognition. Binding is mainly driven by enthalpy with only minor entropic contributions. In several cases binding is determined by GAG length, and in all cases by the position and number of sulfates. Affinities strongly depend on the anomeric modification of the GAG. Highest binding affinities are effected by anomeric functionalization with large fluorophores and by GAG dimerization. Our experimental and theoretical results suggest that the diversity of GAG binding sites and modes is responsible for the observed high affinities and other binding features. The presented new insights into GAG-protein recognition will be of relevance to guide the design of GAG derivatives with customized functions for the engineering of new biomaterials.

Identifiers

PMID30774881
PMCPMC6346292
OpenAlexW2898644069

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.