Evidence map›Paper›PMID 30773782›Full record

ArticleAging cell2019

DAF-16 stabilizes the aging transcriptome and is activated in mid-aged Caenorhabditis elegans to cope with internal stress.

Shang-Tong Li, Han-Qing Zhao, Pan Zhang, Chung-Yi Liang, Yan-Ping Zhang, Ao-Lin Hsu, Meng-Qiu Dong

Open access · goldAbstract read
In one paragraph

Article in Aging cell, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 77 citations in OpenAlex.

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  14. International journal of molecular sciences · 2024
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  15. Transcriptional drift in aging cells: A global decontroller.Proceedings of the National Academy of Sciences of the United States of America · 2024
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  16. Article
  17. Article
  18. Transcriptional drift in aging cells: A global de-controller.bioRxiv : the preprint server for biology · 2023
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  19. Article
  20. Mitochondrial sulfide promotes life span and health span through distinct mechanisms in developing versus adult treatedProceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Shang-Tong LiSchool of Life Sciences, Tsinghua University, Beijing, China.
Han-Qing ZhaoNational Institute of Biological Sciences, Beijing, China.
Pan ZhangNational Institute of Biological Sciences, Beijing, China.
Chung-Yi LiangResearch Center for Healthy Aging, China Medical University, Taichung, Taiwan.
Yan-Ping ZhangNational Institute of Biological Sciences, Beijing, China.
Ao-Lin HsuResearch Center for Healthy Aging, China Medical University, Taichung, Taiwan.
Meng-Qiu DongNational Institute of Biological Sciences, Beijing, China.
National Institute of Biological Sciences, Beijing · CNChina Medical University · TWNational Yang Ming Chiao Tung University · TWPeking University · CNTsinghua University · CN

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Regulation of Heat Shock Transcription Factor in Long-lived AnimalsR01AG028516 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HSU, AO-LIN ALLEN · 2008 to 2017
$2.8M
Beijing Municipal Science and Technology CommissionMinistry of Science and Technology of ChinaMinistry of Science and Technology of Taiwan MOST 102-2311-B-010-010-MY3NIA NIH HHS R01 AG028516NIH HHS P40 OD010440
6 · The paper itself

Abstract

The roles and regulatory mechanisms of transcriptome changes during aging are unclear. It has been proposed that the transcriptome suffers decay during aging owing to age-associated down-regulation of transcription factors. In this study, we characterized the role of a transcription factor DAF-16, which is a highly conserved lifespan regulator, in the normal aging process of Caenorhabditis elegans. We found that DAF-16 translocates into the nucleus in aged wild-type worms and activates the expression of hundreds of genes in response to age-associated cellular stress. Most of the age-dependent DAF-16 targets are different from the canonical DAF-16 targets downstream of insulin signaling. This and other evidence suggest that activation of DAF-16 during aging is distinct from activation of DAF-16 due to reduced signaling from DAF-2. Further analysis showed that it is due in part to a loss of proteostasis during aging. We also found that without daf-16, dramatic gene expression changes occur as early as on adult day 2, indicating that DAF-16 acts to stabilize the transcriptome during normal aging. Our results thus reveal that normal aging is not simply a process in which the gene expression program descends into chaos due to loss of regulatory activities; rather, there is active transcriptional regulation during aging.

Indexed as

Stress, PhysiologicalTranscriptomeAgingAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsForkhead Transcription FactorsSequence Analysis, RNACaenorhabditis elegans Proteinsdaf-16 protein, C elegansForkhead Transcription FactorsagingCaenorhabditis elegansDAF-16proteostasisstress responsetranscriptional regulation

Identifiers

PMID30773782
PMCPMC6516157
OpenAlexW2915239257

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.