Evidence map›Paper›PMID 30771081›Full record

ArticleVirus genes2019

Co-infection with different serotypes of FMDV in vaccinated cattle in Southern Egypt.

Amira Adel Al-Hosary, Ahmed Kandeil, Ahmed Nageh El-Taweel, Ann Nordengrahn, Malik Merza, Rebecca Badra, Ghazi Kayali, Mohamed A Ali

Abstract read
PubMed Publisher
In one paragraph

Article in Virus genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 35 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Amira Adel Al-HosaryDepartment of Animal Medicine (Infectious Diseases), Faculty of Veterinary Medicine, Assiut University, Po. Box 71526, Assiut, Egypt.
Ahmed KandeilCenter of Scientific Excellence for Influenza Viruses, Water Pollution Research Department, Environmental Research Division, National Research Centre (NRC), Egypt, Dokki, Giza, 12622, Egypt. Kandeil_a@hotmail.com.
Ahmed Nageh El-TaweelCenter of Scientific Excellence for Influenza Viruses, Water Pollution Research Department, Environmental Research Division, National Research Centre (NRC), Egypt, Dokki, Giza, 12622, Egypt.
Ann NordengrahnBoehringer Ingelheim Svanova, Uppsala Business Park, Po. Box 1545, Uppsala, Sweden.
Malik MerzaBoehringer Ingelheim Svanova, Uppsala Business Park, Po. Box 1545, Uppsala, Sweden.
Rebecca BadraHuman Link, Hazmieh, Lebanon.
Ghazi KayaliDepartment of Epidemiology, Human Genetics, and Environmental Sciences, University of Texas Health Sciences Center, Houston, TX, USA. ghazi@human-link.org.
Mohamed A AliCenter of Scientific Excellence for Influenza Viruses, Water Pollution Research Department, Environmental Research Division, National Research Centre (NRC), Egypt, Dokki, Giza, 12622, Egypt. mohamedahmedali2004@yahoo.com.
National Research Centre · EGBoehringer Ingelheim (Sweden) · SEAssiut University · EGThe University of Texas Health Science Center at Houston · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

During 2015-2016 period, an outbreak of foot-and-mouth disease virus (FMDV) was observed in cattle in four governorates of the upper of Egypt. The infection was extended to the vaccinated cattle. A total of 54 mouth swabs and serum samples were collected from vaccinated cattle for serological and virological investigation. The typical clinical signs of FMDV infection were observed in all cattle under investigation. All samples were positive for FMDV using molecular methods, while the serological method showed 85% positive of tested samples. Typing of FMDV-positive samples using serotype-specific primers showed that 51.8% of samples were serotype O, 9.2% were serotype A, and 18.5% were SAT 2. Surprisingly, co-infections of serotypes A/SAT 2 (12.9%) and O/SAT 2 (7.4%) were also detected. By geographical location, the 3 serotypes A, O, and SAT2 were detected in all four governorates. The phylogenetic assessment of the detected viruses showed that two distinct groups of FMDV serotype O of East Africa-3 (EA-3) topotype were most closely related to circulating viruses in Sudan, as well as FMDV strains belonging to the topotype VII of serotype SAT 2. The detected SAT 2 strains clustered in separate clades in topotype VII, indicating new incursions. The VP1 signatures and protein sequences of some characterized viruses were analyzed. Multiple mutations were detected in VP1. Therefore, to enhance the control of FMD in Egypt, we recommend establishing an active surveillance system to characterize newly emerging virus strains/serotypes and subsequently updating vaccine strains.

Indexed as

AnimalsAntibodies, ViralCattleCattle DiseasesCoinfectionDisease OutbreaksEgyptFoot-and-Mouth DiseaseFoot-and-Mouth Disease VirusPhylogenySerogroupAntibodies, ViralCo-infectionEgyptFoot-and-mouth disease virusVaccination

Identifiers

PMID30771081
OpenAlexW2912768237

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.