Evidence map›Paper›PMID 30771080›Full record

ArticleVirus genes2019

Genetic characterization of bovine coronavirus in Vietnam.

Jihye Shin, Dongseob Tark, Van Phan Le, SeEun Choe, Ra Mi Cha, Gyu-Nam Park, In-Soo Cho, Bui Thi To Nga, Nguyen Thi Lan, Dong-Jun An

Open access · bronzeAbstract read
In one paragraph

Article in Virus genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.7field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Jihye ShinViral Disease Division, Animal and Plant Quarantine Agency (QIA), Gimcheon, Gyeongbuk, 39660, Republic of Korea.
Dongseob TarkKorea Zoonosis Research Institute, Chonbuk National University, Iksan, Jeonbuk, 54531, Republic of Korea.
Van Phan LeFaculty of Veterinary Medicine, Vietnam National University of Agriculture (VNUA), Hanoi, Vietnam.
SeEun ChoeViral Disease Division, Animal and Plant Quarantine Agency (QIA), Gimcheon, Gyeongbuk, 39660, Republic of Korea.
Ra Mi ChaViral Disease Division, Animal and Plant Quarantine Agency (QIA), Gimcheon, Gyeongbuk, 39660, Republic of Korea.
Gyu-Nam ParkViral Disease Division, Animal and Plant Quarantine Agency (QIA), Gimcheon, Gyeongbuk, 39660, Republic of Korea.
In-Soo ChoViral Disease Division, Animal and Plant Quarantine Agency (QIA), Gimcheon, Gyeongbuk, 39660, Republic of Korea.
Bui Thi To NgaFaculty of Veterinary Medicine, Vietnam National University of Agriculture (VNUA), Hanoi, Vietnam.
Nguyen Thi LanFaculty of Veterinary Medicine, Vietnam National University of Agriculture (VNUA), Hanoi, Vietnam.
Dong-Jun AnViral Disease Division, Animal and Plant Quarantine Agency (QIA), Gimcheon, Gyeongbuk, 39660, Republic of Korea. andj67@korea.kr.
Animal and Plant Quarantine Agency · KRVietnam National University of Agriculture · VNJeonbuk National University · KR

Funding

Animal and Plant Quarantine Agency Project Code No. I-1543083-2017-19-0101
6 · The paper itself

Abstract

A maximum clade credibility tree constructed using the full-length spike (S) and hemagglutinin-esterase genes revealed that Vietnamese Bovine coronavirus (BCoV) strains belong to a single cluster (C1); therefore, they might share a common origin with Cuban and Chinese BCoV strains. The omega values of cluster 1 (C1) and cluster 2 (C2) were 0.15734 and 0.11613, respectively, and naive empirical bayes analysis identified two amino acid positions (179 and 501) in the S protein in C1 and three amino acid positions (113, 501, and 525) in that of C2 that underwent positive selection (p > 99%). The evolutionary rate of C1 was estimated to be 7.6206 × 10

Indexed as

Evolution, MolecularAnimalsCattleCattle DiseasesCoronavirus, BovineCoronavirus InfectionsFecesSpike Glycoprotein, CoronavirusVietnamViral Envelope ProteinsSpike Glycoprotein, CoronavirusViral Envelope ProteinsBovine coronavirusEvolutionary ratePositive selectiontMRCA

Identifiers

PMID30771080
PMCPMC7088966
OpenAlexW2911804279

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.