Evidence map›Paper›PMID 30770873›Full record

ArticleScientific reports2019

Regulation of miRNAs by Snail during epithelial-to-mesenchymal transition in HT29 colon cancer cells.

Patrycja Przygodzka, Izabela Papiewska-Pająk, Helena Bogusz-Koziarska, Ewelina Sochacka, Joanna Boncela, M Anna Kowalska

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Patrycja PrzygodzkaInstitute of Medical Biology, PAS, 106 Lodowa Street, 93232, Lodz, Poland. pprzygodzkaibm@gmail.com.ORCID 0000-0001-7529-8815
Izabela Papiewska-PająkInstitute of Medical Biology, PAS, 106 Lodowa Street, 93232, Lodz, Poland.
Helena Bogusz-KoziarskaInstitute of Medical Biology, PAS, 106 Lodowa Street, 93232, Lodz, Poland.
Ewelina SochackaInstitute of Medical Biology, PAS, 106 Lodowa Street, 93232, Lodz, Poland.
Joanna BoncelaInstitute of Medical Biology, PAS, 106 Lodowa Street, 93232, Lodz, Poland.
M Anna KowalskaInstitute of Medical Biology, PAS, 106 Lodowa Street, 93232, Lodz, Poland.
Institute for Medical Biology · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epithelial-to-mesenchymal transition (EMT) in cancer cells, represents early stages of metastasis and is a promising target in colorectal cancer (CRC) therapy. There have been many attempts to identify markers and key pathways induced throughout EMT but the process is complex and depends on the cancer type and tumour microenvironment. Here we used the colon cancer cell line HT29, which stably overexpressed Snail, the key transcription factor in early EMT, as a model for colorectal adenocarcinoma cells with a pro-metastatic phenotype. We investigated miRNA expression regulation during that phenotypic switching. We found that overexpression of Snail in HT29 cells triggered significant changes in individual miRNA levels but did not change the global efficiency of miRNA processing. Snail abundance repressed the expression of miR-192 and miR-194 and increased miR-205, let-7i and SNORD13 levels. These identified changes correlated with the reported transcriptomic alterations in Snail-overexpressing HT29 cells. We also investigated how Snail affected the miRNA content of extracellular vesicles (EVs) released from HT29 cells. Our data suggest that the presence of Snail significantly alters the complex mRNA/miRNA interactions in the early steps of metastasis and also has an impact on the content of EVs released from HT29 cells.

Indexed as

Epithelial-Mesenchymal TransitionGene Expression RegulationHT29 CellsHumansMicroRNAsSnail Family Transcription FactorsMicroRNAsSNAI1 protein, humanSnail Family Transcription Factors

Identifiers

PMID30770873
PMCPMC6377707
OpenAlexW2912340690

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.