Evidence map›Paper›PMID 30770803›Full record

ArticleNature communications2019

Gigaxonin E3 ligase governs ATG16L1 turnover to control autophagosome production.

Aurora Scrivo, Patrice Codogno, Pascale Bomont

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed, 1 pooled it
5.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 1 synthesis or guideline pooled it, 62 citations in OpenAlex.

  1. Guideline
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  10. Ubiquitin system mutations in neurological diseases.Trends in biochemical sciences · 2024
    Review
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  14. Review
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  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Aurora ScrivoAvenir-Atip team, INM, INSERM, Université Montpellier, 34091, Montpellier, France.
Patrice CodognoInstitut Necker-Enfants Malades (INEM), INSERM U1151-CNRS UMR8253, 75993, Paris, France.
Pascale BomontAvenir-Atip team, INM, INSERM, Université Montpellier, 34091, Montpellier, France. pascale.bomont@inserm.fr.ORCID http://orcid.org/0000-0001-7216-3261
Albert Einstein College of Medicine · USDélégation Paris 5 · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy is an essential self-digestion machinery for cell survival and homoeostasis. Membrane elongation is fundamental, as it drives the formation of the double-membrane vesicles that engulf cytosolic material. LC3-lipidation, the signature of autophagosome formation, results from a complex ubiquitin-conjugating cascade orchestrated by the ATG16L1 protein, whose regulation is unknown. Here, we identify the Gigaxonin-E3 ligase as the first regulator of ATG16L1 turn-over and autophagosome production. Gigaxonin interacts with the WD40 domain of ATG16L1 to drive its ubiquitination and subsequent degradation. Gigaxonin depletion induces the formation of ATG16L1 aggregates and impairs LC3 lipidation, hence altering lysosomal fusion and degradation of the main autophagy receptor p62. Altogether, we demonstrate that the Gigaxonin-E3 ligase controls the production of autophagosomes by a reversible, ubiquitin-dependent process selective for ATG16L1. Our findings unveil the fundamental mechanisms of the control of autophagosome formation, and provide a molecular switch to fine-tune the activation of autophagy.

Indexed as

AnimalsAutophagosomesAutophagyAutophagy-Related ProteinsChlorocebus aethiopsCOS CellsCytoskeletal ProteinsHEK293 CellsHumansUbiquitin-Protein LigasesATG16L1 protein, humanAutophagy-Related ProteinsCytoskeletal ProteinsGAN protein, humanUbiquitin-Protein Ligases

Identifiers

PMID30770803
PMCPMC6377711
OpenAlexW2913820475

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.