Evidence map›Paper›PMID 30770787›Full record

ArticleTranslational psychiatry2019

Brain region-specific alterations of RNA editing in PDE8A mRNA in suicide decedents.

Fabrice Chimienti, Laurent Cavarec, Laurent Vincent, Nicolas Salvetat, Victoria Arango, Mark D Underwood, J John Mann, Jean-François Pujol, Dinah Weissmann

Erratum issued Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. It is linked to trial NCT05603819 (Clinical Validation Study for EDIT-B Test), which is not on this map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT05603819 completednot on this mapstarted 2022, after this paper: background citation

Clinical Validation Study for EDIT-B Test: an Aid for Differential Diagnosis of Bipolar Disorder, Based on RNA Editing Blood Biomarkers

TypeobservationalSponsorAlcediagRan2022 to 2024Enrolled418ConditionsBipolar Disorder, Major Depressive DisorderArmsEDIT-B
3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Pooled it
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  14. The Role of PDE8 in T Cell Recruitment and Function in Inflammation.Frontiers in cell and developmental biology · 2021
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 2 countries.

Fabrice ChimientiALCEDIAG/ Sys2Diag, CNRS UMR 9005, Parc Euromédecine, Montpellier, France. fabrice.chimienti@alcediag-alcen.com.
Laurent CavarecGenomic Vision, Green Square, 80-84 rue des Meuniers, 92220, Bagneux, France.
Laurent VincentCommissariat à l'Energie Atomique, Fontenay aux Roses, France.
Nicolas SalvetatALCEDIAG/ Sys2Diag, CNRS UMR 9005, Parc Euromédecine, Montpellier, France.
Victoria ArangoDivision of Molecular Imaging and Neuropathology, New York State Psychiatric Institute, New York, NY, USA.
Mark D UnderwoodDivision of Molecular Imaging and Neuropathology, New York State Psychiatric Institute, New York, NY, USA.
J John MannDivision of Molecular Imaging and Neuropathology, New York State Psychiatric Institute, New York, NY, USA.
Jean-François PujolALCEDIAG/ Sys2Diag, CNRS UMR 9005, Parc Euromédecine, Montpellier, France.
Dinah WeissmannALCEDIAG/ Sys2Diag, CNRS UMR 9005, Parc Euromédecine, Montpellier, France.
Centre National de la Recherche Scientifique · FRModélisation et Ingénierie des Systèmes Complexes Biologiques pour le Diagnostic · FRColumbia University · USCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRGenomic Vision (France) · FRNew York Psychoanalytic Society and Institute · USNew York State Psychiatric Institute

Funding

THE NEUROBIOLOGY OF SUICIDAL BEHAVIORP50MH062185 · NIMH · NEW YORK STATE PSYCHIATRIC INSTITUTE DBA RESEARCH FOUNDATION FOR MENTAL HYGIENE, INC · PI MANN, JOSEPH JOHN · 2000 to 2009
$21.7M
POSTMORTEM NEUROCHEMICAL STUDIES IN SUICIDER01MH040210 · NIMH · WEILL MEDICAL COLLEGE OF CORNELL UNIV · PI UNDERWOOD, MARK D · 1985 to 2016
$7.0M
NIMH NIH HHS P50 MH062185NIMH NIH HHS R01 MH040210
6 · The paper itself

Abstract

Phosphodiesterases (PDE) are key modulators of signal transduction and are involved in inflammatory cell activation, memory and cognition. There is a two-fold decrease in the expression of phosphodiesterase 8A (PDE8A) in the temporal cortex of major depressive disorder (MDD) patients. Here, we studied PDE8A mRNA-editing profile in two architectonically distinct neocortical regions in a clinically well-characterized cohort of age- and sex-matched non-psychiatric drug-free controls and depressed suicide decedents. By using capillary electrophoresis single-stranded conformational polymorphism (CE-SSCP), a previously validated technique to identify A-to-I RNA modifications, we report the full editing profile of PDE8A in the brain, including identification of two novel editing sites. Editing of PDE8A mRNA displayed clear regional difference when comparing dorsolateral prefrontal cortex (BA9) and anterior cingulate cortex (BA24). Furthermore, we report significant intra-regional differences between non-psychiatric control individuals and depressed suicide decedents, which could discriminate the two populations. Taken together, our results (i) highlight the importance of immune/inflammatory markers in major depressive disorder and suicide and (ii) establish a direct relationship between A-to-I RNA modifications of peripheral markers and A-to-I RNA editing-related modifications in brain. This work provides the first immune response-related brain marker for suicide and could pave the way for the identification of a blood-based biomarker that predicts suicidal behavior.

Indexed as

Suicide, Completed3',5'-Cyclic-AMP PhosphodiesterasesAdolescentAdultAutopsyCase-Control StudiesGyrus CinguliHumansMajor Depressive DisorderMaleMiddle AgedPolymorphism, Single-Stranded ConformationalPrefrontal CortexRNA EditingRNA, MessengerYoung Adult3',5'-Cyclic-AMP PhosphodiesterasesPDE8A protein, humanRNA, Messenger

Identifiers

PMID30770787
PMCPMC6377659
OpenAlexW2913766634

What OpenQuestion holds

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LicenceCC BY
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.