Evidence map›Paper›PMID 30770731›Full record

ArticleBMC plant biology2019

Isolation and functional validation of the CmLOX08 promoter associated with signalling molecule and abiotic stress responses in oriental melon, Cucumis melo var. makuwa Makino.

Chenghui Wang, Ge Gao, Songxiao Cao, Qunjie Xie, Hongyan Qi

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 39 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Chenghui WangCollege of Horticulture, Shenyang Agricultural University, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, National & Local Joint Engineering Research Center of Northern Horticultural Facilities Design & Application Technology (Liaoning), Liaoning Shenyang, 110866, People's Republic of China.
Ge GaoCollege of Horticulture, Shenyang Agricultural University, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, National & Local Joint Engineering Research Center of Northern Horticultural Facilities Design & Application Technology (Liaoning), Liaoning Shenyang, 110866, People's Republic of China.
Songxiao CaoCollege of Horticulture, Shenyang Agricultural University, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, National & Local Joint Engineering Research Center of Northern Horticultural Facilities Design & Application Technology (Liaoning), Liaoning Shenyang, 110866, People's Republic of China.
Qunjie XieCollege of Horticulture, Shenyang Agricultural University, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, National & Local Joint Engineering Research Center of Northern Horticultural Facilities Design & Application Technology (Liaoning), Liaoning Shenyang, 110866, People's Republic of China.
Hongyan QiCollege of Horticulture, Shenyang Agricultural University, Key Laboratory of Protected Horticulture of Education Ministry and Liaoning Province, National & Local Joint Engineering Research Center of Northern Horticultural Facilities Design & Application Technology (Liaoning), Liaoning Shenyang, 110866, People's Republic of China. hyqiaaa@126.com.
Shenyang Agricultural University · CN

Funding

Agriculture Research System of China CARS-25National Natural Science Foundation of China 31471868Shenyang Science and Technology Project 17-143-3-00
6 · The paper itself

Abstract

backgroundLipoxygenases (LOXs) play significant roles in abiotic stress responses, and identification of LOX gene promoter function can make an important contribution to elucidating resistance mechanisms. Here, we cloned the CmLOX08 promoter of melon (Cucumis melo) and identified the main promoter regions regulating transcription in response to signalling molecules and abiotic stresses.

resultsThe 2054-bp promoter region of CmLOX08 from melon leaves was cloned, and bioinformatic analysis revealed that it harbours numerous cis-regulatory elements associated with signalling molecules and abiotic stress. Five 5'-deletion fragments obtained from the CmLOX08 promoter-2054 (LP1), 1639 (LP2), 1284 (LP3), 1047 (LP4), and 418 bp (LP5)-were fused with a GUS reporter gene and used for tobacco transient assays. Deletion analysis revealed that in response to abscisic acid, salicylic acid, and hydrogen peroxide, the GUS activity of LP1 was significantly higher than that of the mock-treated control and LP2, indicating that the - 2054- to - 1639-bp region positively regulates expression induced by these signalling molecules. However, no deletion fragment GUS activity was induced by methyl jasmonate. In response to salt, drought, and wounding treatments, LP1, LP2, and LP4 promoted significantly higher GUS expression compared with the control. Among all deletion fragments, LP4 showed the highest GUS expression, indicating that - 1047 to - 1 bp is the major region regulating promoter activity and that the - 1047 to - 418-bp region positively regulates expression induced by salt, drought, and wounding, whereas the - 1284 to - 1047-bp region is a negative regulatory segment. Interestingly, although the GUS activity of LP1 and LP2 was not affected by temperature changes, that of LP3 was significantly induced by heat, indicating that the - 1284- to - 1-bp region is a core sequence responding to heat and the - 2054- to - 1284-bp region negatively regulates expression induced by heat. Similarly, the - 1047- to - 1-bp region is the main sequence responding to cold, whereas the - 2054- to - 1047-bp region negatively regulates expression induced by cold.

conclusionsWe cloned the CmLOX08 promoter and demonstrated that it is a signalling molecule/stress-inducible promoter. Furthermore, we identified core and positive/negative regulatory regions responding to three signalling molecules and five abiotic stresses.

Indexed as

Gene Expression Regulation, PlantSignal TransductionStress, PhysiologicalAbscisic AcidAcetatesCucumis meloCyclopentanesDroughtsGenes, ReporterHydrogen PeroxideOxylipinsPlant Growth RegulatorsPromoter Regions, GeneticSalicylic AcidSodium ChlorideAbscisic AcidAcetatesCyclopentanesHydrogen Peroxidemethyl jasmonateOxylipinsPlant Growth RegulatorsSalicylic AcidSodium ChlorideAbiotic stressLipoxygenaseOriental melonPromoterSignalling molecule

Identifiers

PMID30770731
PMCPMC6377772
OpenAlexW2921655046

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.