Evidence map›Paper›PMID 30770247›Full record

ArticleImmunity2019

Spatial and Temporal Mapping of Human Innate Lymphoid Cells Reveals Elements of Tissue Specificity.

Naomi A Yudanin, Frederike Schmitz, Anne-Laure Flamar, Joseph J C Thome, Elia Tait Wojno, Jesper B Moeller, Melanie Schirmer, Isabel J Latorre, Ramnik J Xavier, Donna L Farber and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 124 papers.

0numbers the graph read from it
0cells of the map it votes in
124citing papers in PubMed
10.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

124 citing papers in PubMed, 178 citations in OpenAlex.

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64 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 1 country.

Naomi A YudaninJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA.
Frederike SchmitzJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA.
Anne-Laure FlamarJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA.
Joseph J C ThomeColumbia Center for Translational Immunology, Department of Surgery and Department of Microbiology and Immunology, Columbia University Medical Center, NY, New York, 10032, USA.
Elia Tait WojnoJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA; Baker Institute for Animal Health, Department of Microbiology and Immunology, Cornell University College of Veterinary Medicine, Ithaca, NY 14850 USA.
Jesper B MoellerJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA.
Melanie SchirmerHarvard T.H. Chan School of Public Health, Boston, MA, USA; The Broad Institute of MIT and Harvard, Cambridge, MA, USA.
Isabel J LatorreThe Broad Institute of MIT and Harvard, Cambridge, MA, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Boston, MA.
Ramnik J XavierThe Broad Institute of MIT and Harvard, Cambridge, MA, USA; Center for Computational and Integrative Biology, Massachusetts General Hospital, Boston, MA.
Donna L FarberColumbia Center for Translational Immunology, Department of Surgery and Department of Microbiology and Immunology, Columbia University Medical Center, NY, New York, 10032, USA.
Laurel A MonticelliJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA; Division of Pulmonary and Critical Care Medicine, Joan and Sanford I. Weill Department of Medicine, Weill Cornell Medicine, Cornell University, New York, NY, 10021, USA. Electronic address: lam2031@med.cornell.edu.
David ArtisJill Roberts Institute for Research in Inflammatory Bowel Disease, Joan and Stanford I. Weill Department of Medicine, Weill Cornell Medicine, New York, NY, 10021, USA. Electronic address: dartis@med.cornell.edu.
Cornell University · USColumbia University Irving Medical Center · USBroad Institute · USHarvard University · USMassachusetts General Hospital · USNew York State College of Veterinary Medicine · USWeill Cornell Medicine · US

Funding

Transcriptomics and Repertoire ProfilingP01AI106697 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Peter Alan Sims · 2013 to 2026
$31.3M
Regulation of protective immunity following enteric viral infectionU01AI095608 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI ARTIS, DAVID, SONNENBERG, GREGORY F · 2011 to 2025
$11.0M
Innate immunity and inflammation following helminth infectionR01AI074878 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI ARTIS, DAVID · 2008 to 2019
$4.2M
Regulation and function of innate lymphoid cells in the gutR01AI095466 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI ARTIS, DAVID · 2011 to 2022
$3.7M
Role of the prostaglandin D2 receptor CRTH2 in helminth-induced type 2 inflammation in the intestine.R01AI130379 · NIAID · UNIVERSITY OF WASHINGTON · PI Elia D Tait Wojno · 2017 to 2026
$3.5M
Neuro-immune regulation of intestinal inflammationR01DK126871 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI ARTIS, DAVID · 2020 to 2024
$3.2M
Regulation and function of innate lymphoid cells during influenza virus infectionR01AI102942 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI ARTIS, DAVID · 2013 to 2017
$2.1M
Prostaglandin regulation of type 2 inflammationK22AI116729 · NIAID · CORNELL UNIVERSITY · PI TAIT WOJNO, ELIA D · 2016 to 2017
$267k
β2AR regulation of WAT ILC2-mediated metabolic homeostasisF32DK109630 · NIDDK · WEILL MEDICAL COLL OF CORNELL UNIV · PI YUDANIN, NAOMI AVA · 2016 to 2018
$156k
Immuno-metabolic regulation of lung inflammationF32AI134018 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI MONTICELLI, LAUREL ANNE · 2017 to 2017
$57k
NIAID NIH HHS F32 AI134018NIAID NIH HHS K22 AI116729NIAID NIH HHS P01 AI106697NIAID NIH HHS R01 AI074878NIAID NIH HHS R01 AI095466NIAID NIH HHS R01 AI102942NIAID NIH HHS R01 AI130379NIAID NIH HHS U01 AI095608NIDDK NIH HHS F32 DK109630NIDDK NIH HHS R01 DK126871
6 · The paper itself

Abstract

Innate lymphoid cells (ILC) play critical roles in regulating immunity, inflammation, and tissue homeostasis in mice. However, limited access to non-diseased human tissues has hindered efforts to profile anatomically-distinct ILCs in humans. Through flow cytometric and transcriptional analyses of lymphoid, mucosal, and metabolic tissues from previously healthy human organ donors, here we have provided a map of human ILC heterogeneity across multiple anatomical sites. In contrast to mice, human ILCs are less strictly compartmentalized and tissue localization selectively impacts ILC distribution in a subset-dependent manner. Tissue-specific distinctions are particularly apparent for ILC1 populations, whose distribution was markedly altered in obesity or aging. Furthermore, the degree of ILC1 population heterogeneity differed substantially in lymphoid versus mucosal sites. Together, these analyses comprise a comprehensive characterization of the spatial and temporal dynamics regulating the anatomical distribution, subset heterogeneity, and functional potential of ILCs in non-diseased human tissues.

Indexed as

AdolescentAdultAgedAgingAnimalsChildChild, PreschoolFemaleGenetic HeterogeneityHumansImmunity, InnateInfantInfant, NewbornLymphocytesMaleMice

Identifiers

PMID30770247
PMCPMC6594374
OpenAlexW2913855639

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.