Evidence map›Paper›PMID 30769886›Full record

ArticleInternational journal of molecular sciences2019

GmZPR3d Interacts with GmHD-ZIP III Proteins and Regulates Soybean Root and Nodule Vascular Development.

Suresh Damodaran, Amélie Dubois, Juan Xie, Qin Ma, Valérie Hindié, Senthil Subramanian

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Suresh DamodaranDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. sureshd@wustl.edu.ORCID 0000-0002-7049-2480
Amélie DuboisDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. amelie2807@hotmail.com.
Juan XieDepartment of Mathematics and Statistics, South Dakota State University, Brookings, SD 57007, USA. Juan.xie@sdstate.edu.
Qin MaDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. qin.ma@sdstate.edu.ORCID 0000-0002-3264-8392
Valérie HindiéHybrigenics Services, 3-5 Impasse Reille, 75014 Paris, France. hindie.valerie@gmail.com.
Senthil SubramanianDepartment of Agronomy, Horticulture and Plant Science, South Dakota State University, Brookings, SD 57007, USA. Senthil.subramanian@sdstate.edu.

Funding

National Institute of Food and Agriculture 2010-65116-20514National Science Foundation #IIA-1355423South Dakota Soybean Research and Promotion Council SA1400515
6 · The paper itself

Abstract

Fabaceans produce two major classes of symbiotic nodules: the indeterminate type characterized by a persistent meristem, and the determinate type that lacks a persistent meristem. The class III homeodomain leucine zipper (HD-ZIP III) transcription factor family influence development of multiple lateral organs and meristem maintenance, but their role in determinate nodule development is not known. HD-ZIP III protein activity is post-translationally regulated by members of the small leucine zipper protein (ZPR) family in arabidopsis. We characterized the ZPR gene family in soybean and evaluated their ability to interact with two key members of GmHD-ZIP III family through yeast two-hybrid assays. GmZPR3d displayed the strongest interaction with GmHD-ZIP III-2 among the different pairs evaluated. GmHD-ZIP III-1, -2, and GmZPR3d showed overlapping expression patterns in the root stele and in nodule parenchyma tissues. Over-expression of GmZPR3d resulted in ectopic root secondary xylem formation, and enhanced expression of vessel-specific master switch genes in soybean. The nodules in ZPR3d over-expressing roots were larger in size, had a relatively larger central zone and displayed increased nodule vascular branching. The results from this study point to a key role for GmZPR3d in soybean root and nodule development.

Indexed as

ArabidopsisArabidopsis ProteinsGene Expression Regulation, PlantGlycine maxHomeodomain ProteinsLeucine ZippersMeristemPlant DevelopmentPlant RootsRoot Nodules, PlantArabidopsis ProteinsHD-Zip protein, ArabidopsisHomeodomain ProteinsHD-ZIP IIInodulesoybeanvasculature developmentyeast two-hybridZPR

Identifiers

PMID30769886
PMCPMC6412583

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.