Evidence map›Paper›PMID 30769341›Full record

ArticlePhysical biology2019

Facile single-molecule pull-down assay for analysis of endogenous proteins.

Benjamin Croop, Kyu Young Han

Abstract read
In one paragraph

Article in Physical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Benjamin CroopCREOL, The College of Optics and Photonics, University of Central Florida, Orlando, FL, United States of America.ORCID 0000-0002-8384-000X
Kyu Young HanCREOL, The College of Optics and Photonics, University of Central Florida, Orlando, FL, United States of America.ORCID 0000-0002-1448-3125

Funding

Contribution of transcriptional mutagenesis of oxidative DNA lesions to generatingnew mutant alpha-synuclein species and aggregation toward the pathogenesis of Parkinson'sdiseaseR01NS100919 · NINDS · UNIVERSITY OF CENTRAL FLORIDA · PI KIM, YOON-SEONG · 2018 to 2022
$1.7M
NINDS NIH HHS R01 NS100919
6 · The paper itself

Abstract

The single-molecule pull-down (SiMPull) assay analyzes molecular complexes in physiological conditions from cell or tissue lysates. Currently the approach requires a lengthy sample preparation process, which has largely prevented the widespread adoption of this technique in bioanalysis. Here, we present a simplified SiMPull assay based upon dichlorodimethylsilane-Tween-20 passivation and F(ab) fragment labeling. Our passivation is a much shorter process than the standard polyethylene glycol passivation used in most single-molecule studies. The use of F(ab) fragments for indirect fluorescent labeling rather than divalent F(ab')

Indexed as

Antigen-Antibody ReactionsHumansImmunoglobulin Fab FragmentsImmunoglobulin GImmunoprecipitationMicroscopy, FluorescencePolysorbatesSilanesdichlorodimethylsilaneImmunoglobulin Fab FragmentsImmunoglobulin GPolysorbatesSilanes

Identifiers

PMID30769341
PMCPMC9238377

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.