Evidence map›Paper›PMID 30768926›Full record

ArticleBiochemical pharmacology2019

Alkylphenol inverse agonists of HCN1 gating: H-bond propensity, ring saturation and adduct geometry differentially determine efficacy and potency.

Rebecca L Joyce, Nicole P Beyer, Georgia Vasilopoulos, Kellie A Woll, Adam C Hall, Roderic G Eckenhoff, Dipti N Barman, J David Warren, Gareth R Tibbs, Peter A Goldstein

Open access · greenAbstract read
In one paragraph

Article in Biochemical pharmacology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Rebecca L JoyceWeill Cornell Medicine, New York, NY, United States.
Nicole P BeyerWeill Cornell Medicine, New York, NY, United States.
Georgia VasilopoulosWeill Cornell Medicine, New York, NY, United States.
Kellie A WollUniversity of Pennsylvania Perelman School of Medicine, Philadelphia, PA, United States.
Adam C HallSmith College, Northampton, MA, United States.
Roderic G EckenhoffUniversity of Pennsylvania Perelman School of Medicine, Philadelphia, PA, United States.
Dipti N BarmanWeill Cornell Medicine, New York, NY, United States.
J David WarrenWeill Cornell Medicine, New York, NY, United States.
Gareth R TibbsWeill Cornell Medicine, New York, NY, United States. Electronic address: tibbsga@med.cornell.edu.
Peter A GoldsteinWeill Cornell Medicine, New York, NY, United States.
Cornell University · USUniversity of Pennsylvania · USSmith College · US

Funding

X-ray and Neutron Interferometry Studies of Anesthetic Interactions with VoltageP01GM055876 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI ECKENHOFF, RODERIC G · 1997 to 2017
$22.4M
NIGMS NIH HHS P01 GM055876
6 · The paper itself

Abstract

background and purposeIn models of neuropathic pain, inhibition of HCN1 is anti-hyperalgesic. 2,6-di-iso-propyl phenol (propofol) and its non-anesthetic congener, 2,6-di-tert-butyl phenol, inhibit HCN1 channels by stabilizing closed state(s). EXPERIMENTAL APPROACH: Using in vitro electrophysiology and kinetic modeling, we systematically explore the contribution of ligand architecture to alkylphenol-channel coupling. KEY

resultsWhen corrected for changes in hydrophobicity (and propensity for intra-membrane partitioning), the decrease in potency upon 1-position substitution (NCO∼OH >> SH >>> F) mirrors the ligands' H-bond acceptor (NCO > OH > SH >>> F) but not donor profile (OH > SH >>> NCO∼F). H-bond elimination (OH to F) corresponds to a ΔΔG of ∼4.5 kCal mol CONCLUSIONS AND IMPLICATIONS: A hydrophobicity-independent decrement in potency at higher volumes suggests the alkylbenzene site has a volume of ≥800 Å

Indexed as

Amino Acid SequenceAnimalsCryoelectron MicroscopyHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsIon Channel GatingMiceModels, MolecularOocytesPhenolsPotassium ChannelsProtein ConformationProtein IsoformsStructure-Activity RelationshipXenopus laevisHcn1 protein, mouseHyperpolarization-Activated Cyclic Nucleotide-Gated ChannelsPhenolsPotassium ChannelsProtein Isoforms2-Fluoro-13-di-iso-propylbenzeneAlkylphenolAnti-hyperalgesiaCyclohexanolHCN channelsInverse agonistsKinetic modelingNeuropathic painPhenyl-fluorinePhenyl-isocyanatePhenyl-thiolPropofol

Identifiers

PMID30768926
PMCPMC6599521
OpenAlexW2911596600

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.