Evidence map›Paper›PMID 30767095›Full record

ArticleEnvironmental geochemistry and health2019

Elevated level of arsenic negatively influences nifH gene expression of isolated soil bacteria in culture condition as well as soil system.

Arindam Chakraborty, Atif Aziz Chowdhury, Kiron Bhakat, Ekramul Islam

Abstract read
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In one paragraph

Article in Environmental geochemistry and health, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Arindam ChakrabortyDepartment of Microbiology, University of Kalyani, Kalyani, West Bengal, 741235, India.
Atif Aziz ChowdhuryDepartment of Microbiology, University of Kalyani, Kalyani, West Bengal, 741235, India.
Kiron BhakatDepartment of Microbiology, University of Kalyani, Kalyani, West Bengal, 741235, India.
Ekramul IslamDepartment of Microbiology, University of Kalyani, Kalyani, West Bengal, 741235, India. ekramul.rs@gmail.com.ORCID http://orcid.org/0000-0001-9033-1732
University of Kalyani · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comprehensive studies on the effect of arsenic (As) on free-living diazotrophs that play a crucial role in soil fertility by nitrogen fixation are still scanty. Here, we isolated three free-living bacteria from rice field with potential nitrogen-fixing ability and investigated the impact of As on their nifH gene expression and extracellular polysaccharide (EPS) production in culture condition and soil system. 16S rRNA sequence analysis showed that the isolated bacteria were affiliated to β-Proteobacteria, γ-Proteobacteria and Firmicutes. As(III) exposure to bacterial isolates followed by RT-qPCR analysis revealed that elevated levels of As reduced the expression of nifH gene in selective bacteria, both in culture medium and soil condition. We also noticed reduced production of EPS under higher concentration of As. All the three bacteria showed high tolerance to As(III), able to oxidize As and exhibited significant plant growth-promoting traits. This investigation indicated that an environment exposed with higher concentration of As might perturbed the activity of free-living diazotrophs in agricultural soil system.

Indexed as

Soil MicrobiologyArsenicBacteriaCulture MediaEnvironmental PollutantsGene ExpressionNitrogen-Fixing BacteriaOryzaOxidoreductasesPolysaccharides, BacterialRNA, Ribosomal, 16SSoilArsenicCulture MediaEnvironmental Pollutantsnitrogenase reductaseOxidoreductasesPolysaccharides, BacterialRNA, Ribosomal, 16SSoilArsenic contaminationExtracellular polysaccharideFree-living N2-fixing bacterianifH gene expressionPlant growth-promoting trait

Identifiers

PMID30767095
OpenAlexW2914538773

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.