Evidence map›Paper›PMID 30765858›Full record

ArticleScientific reports2019

Integrated analysis of mRNAs and long noncoding RNAs in the semen from Holstein bulls with high and low sperm motility.

Xiuge Wang, Chunhong Yang, Fang Guo, Yaran Zhang, Zhihua Ju, Qiang Jiang, Xueming Zhao, Yong Liu, Han Zhao, Jinpeng Wang and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 62 citations in OpenAlex.

  1. Current Applications and Future Prospects of High-ThroughputAnimals : an open access journal from MDPI · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Single Sperm RNA signatures reveal MicroRNA biomarkers for male subfertility.Journal of assisted reproduction and genetics · 2024
    Article
  9. Article
  10. Sperm long non-coding RNAs as markers for ram fertility.Frontiers in veterinary science · 2024
    Article
  11. Article
  12. Article
  13. QTLs and Candidate Genes Associated with Semen Traits in Merino Sheep.Animals : an open access journal from MDPI · 2023
    Article
  14. Harnessing male germline epigenomics for the genetic improvement in cattle.Journal of animal science and biotechnology · 2023
    Review
  15. Article
  16. Review
  17. Review
  18. Article
  19. LncRNAs in domesticated animals: from dog to livestock species.Mammalian genome : official journal of the International Mammalian Genome Society · 2022
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

Xiuge WangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Chunhong YangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Fang GuoDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Yaran ZhangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Zhihua JuDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Qiang JiangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Xueming ZhaoEmbryo Biotechnology and Reproduction Laboratory, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, P.R. China.
Yong LiuDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Han ZhaoCollege of Life Sciences, Shandong Normal University, Jinan, 250014, P.R. China.
Jinpeng WangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Yan SunDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Changfa WangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China.
Huabin ZhuEmbryo Biotechnology and Reproduction Laboratory, Institute of Animal Sciences, Chinese Academy of Agricultural Sciences, Beijing, 100193, P.R. China.
Jinming HuangDairy Cattle Research Center, Shandong Academy of Agricultural Sciences, Jinan, 250131, P.R. China. huangjinm@sina.com.
Shandong Academy of Agricultural Sciences · CNChinese Academy of Agricultural Sciences · CNShandong Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sperm motility is the main index used to assess the quality of bull semen. It may also be used to evaluate the fertility potential of bulls. Protein-coding mRNA and long noncoding RNA (lncRNA) participate in the regulation of spermatogenesis. Here, we employed strand-specific RNA sequencing to profile the semen transcriptome (mRNA and lncRNA) of six paired full-sibling Holstein bulls with divergent sperm motility and to determine the functions of mRNA and lncRNA in sperm motility. Among 20,875 protein-encoding genes detected in semen, 19 were differentially expressed between the high sperm motility group (H: H1, H2, and H3) and low sperm motility group (L: L1, L2, and L3). Of the 11,561 lncRNAs identified in sperm, 2,517 were differentially expressed between the H and L groups. We found that TCONS_00041733 lncRNA targets the node gene EFNA1 (ephrin A1), involved in male reproductive physiology. Our study provides a global mRNA and lncRNA transcriptome of bull semen, as well as novel insights into the regulation of neighboring protein coding by lncRNAs and the influence of mRNAs on sperm motility.

Indexed as

AnimalsBody FluidsCattleFertilityMaleRNA, Long NoncodingRNA, MessengerSemenSemen AnalysisSpermatogenesisSpermatozoaSperm MotilityTestisTranscriptomeRNA, Long NoncodingRNA, Messenger

Identifiers

PMID30765858
PMCPMC6376035
OpenAlexW2922102935

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.