Evidence map›Paper›PMID 30765704›Full record

ArticleNature communications2019

Diversity within the adenovirus fiber knob hypervariable loops influences primary receptor interactions.

Alexander T Baker, Alexander Greenshields-Watson, Lynda Coughlan, James A Davies, Hanni Uusi-Kerttula, David K Cole, Pierre J Rizkallah, Alan L Parker

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 69 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Alexander T BakerDivision of Cancer and Genetics, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK.
Alexander Greenshields-WatsonDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK.
Lynda CoughlanDepartment of Microbiology, Icahn School of Medicine at Mount Sinai, New York, NY, 10029-6574, USA.ORCID http://orcid.org/0000-0001-9880-6560
James A DaviesDivision of Cancer and Genetics, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK.
Hanni Uusi-KerttulaDivision of Cancer and Genetics, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK.
David K ColeDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK.
Pierre J RizkallahDivision of Infection and Immunity, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK.
Alan L ParkerDivision of Cancer and Genetics, School of Medicine, Cardiff University, Cardiff, CF14 4XN, UK. ParkerAL@Cardiff.ac.uk.ORCID http://orcid.org/0000-0002-9302-1761
Cardiff University · GBIcahn School of Medicine at Mount Sinai · USImmunocore (United Kingdom) · GB

Funding

NIAID NIH HHS HHSN272201400008C
6 · The paper itself

Abstract

Adenovirus based vectors are of increasing importance for wide ranging therapeutic applications. As vaccines, vectors derived from human adenovirus species D serotypes 26 and 48 (HAdV-D26/48) are demonstrating promising efficacy as protective platforms against infectious diseases. Significant clinical progress has been made, yet definitive studies underpinning mechanisms of entry, infection, and receptor usage are currently lacking. Here, we perform structural and biological analysis of the receptor binding fiber-knob protein of HAdV-D26/48, reporting crystal structures, and modelling putative interactions with two previously suggested attachment receptors, CD46 and Coxsackie and Adenovirus Receptor (CAR). We provide evidence of a low affinity interaction with CAR, with modelling suggesting affinity is attenuated through extended, semi-flexible loop structures, providing steric hindrance. Conversely, in silico and in vitro experiments are unable to provide evidence of interaction between HAdV-D26/48 fiber-knob with CD46, or with Desmoglein 2. Our findings provide insight into the cell-virus interactions of HAdV-D26/48, with important implications for the design and engineering of optimised Ad-based therapeutics.

Indexed as

Adenoviridae InfectionsAdenoviruses, HumanAmino Acid SequenceCapsid ProteinsCoxsackie and Adenovirus Receptor-Like Membrane ProteinCrystallography, X-RayGenetic VariationHumansMembrane Cofactor ProteinModels, MolecularPhylogenyProtein BindingProtein ConformationReceptors, VirusSequence Homology, Amino AcidCapsid ProteinsCD46 protein, humanCoxsackie and Adenovirus Receptor-Like Membrane Proteinhexon capsid protein, AdenovirusMembrane Cofactor ProteinReceptors, Virus

Identifiers

PMID30765704
PMCPMC6376029
OpenAlexW2889535280

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.