Evidence map›Paper›PMID 30765603›Full record

ArticleThe Journal of biological chemistry2019

Impact of amino acid substitutions at secondary structures in the BRCT domains of the tumor suppressor BRCA1: Implications for clinical annotation.

Vanessa C Fernandes, Volha A Golubeva, Giuliano Di Pietro, Cara Shields, Kwabena Amankwah, Thales C Nepomuceno, Giuliana de Gregoriis, Renata B V Abreu, Carly Harro, Thiago T Gomes and 6 more

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Reinterpretation of Conflicting ClinVarDiagnostics (Basel, Switzerland) · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Assessment ofJCO clinical cancer informatics · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Olaparib-ResistantCells · 2023
    Article
  15. Article
  16. Article
  17. ACS omega · 2022
    Article
  18. Article
  19. Article
  20. Functional Restoration ofFrontiers in pharmacology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 7 institutions in 2 countries.

Vanessa C FernandesFrom the Instituto Nacional de Câncer, Programa de Pesquisa Clínica, Rio de Janeiro, Brazil 20231-050.
Volha A Golubevathe Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612.
Giuliano Di Pietrothe Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612; the Universidade Federal de Sergipe, Campus São Cristóvão, Brazil 49100-000.
Cara Shieldsthe Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612.
Kwabena Amankwahthe Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612.
Thales C NepomucenoFrom the Instituto Nacional de Câncer, Programa de Pesquisa Clínica, Rio de Janeiro, Brazil 20231-050; the Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612.
Giuliana de GregoriisFrom the Instituto Nacional de Câncer, Programa de Pesquisa Clínica, Rio de Janeiro, Brazil 20231-050.
Renata B V AbreuFrom the Instituto Nacional de Câncer, Programa de Pesquisa Clínica, Rio de Janeiro, Brazil 20231-050.
Carly Harrothe Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612; the Department of Cell Biology, Microbiology, College of Arts and Sciences, University of South Florida Cancer Biology Ph.D. Program, Tampa, Florida 33612.
Thiago T Gomesthe Instituto Federal do Rio de Janeiro, Rio de Janeiro 20270-021, Brazil.
Ricceli F Silvathe Instituto Federal do Rio de Janeiro, Rio de Janeiro 20270-021, Brazil.
Guilherme Suarez-KurtzFrom the Instituto Nacional de Câncer, Programa de Pesquisa Clínica, Rio de Janeiro, Brazil 20231-050.
Fergus J Couchthe Department of Laboratory Medicine, Mayo Clinic, Rochester, Minnesota 55905.
Edwin S Iversenthe Department of Statistics, Duke University, Durham, North Carolina 27710.
Alvaro N A Monteirothe Cancer Epidemiology Program, H. Lee Moffitt Cancer Center and Research Institute, Tampa, Florida 33612. Electronic address: alvaro.monteiro@moffitt.org.
Marcelo A CarvalhoFrom the Instituto Nacional de Câncer, Programa de Pesquisa Clínica, Rio de Janeiro, Brazil 20231-050. Electronic address: marcelo.carvalho@ifrj.edu.br.
Instituto Nacional de Câncer - INCA · BRMoffitt Cancer Center · USInstituto Federal do Rio de Janeiro · BRDuke University · USMayo Clinic · USUniversidade Federal de Sergipe · BRUniversity of South Florida · US

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
BRCA1 and BRCA2 missense mutations and breast cancer riskU01CA116167 · NCI · MAYO CLINIC ROCHESTER · PI COUCH, FERGUS JOSEPH · 2013 to 2017
$2.7M
NCI NIH HHS P30 CA076292NCI NIH HHS U01 CA116167
6 · The paper itself

Abstract

Genetic testing for

Indexed as

BRCA1 ProteinBreast NeoplasmsModels, MolecularMutation, MissenseOvarian NeoplasmsAmino Acid SubstitutionFemaleHEK293 CellsHumansProtein DomainsStructure-Activity RelationshipBRCA1 ProteinBRCA1 protein, humanBRCA1BRCT domainsbreast cancerbreast cancer riskcancer preventionclinical annotationclinical risk assessmenthuman geneticsprotein conformationVarCall

Identifiers

PMID30765603
PMCPMC6463708
OpenAlexW2912560052

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.