Evidence map›Paper›PMID 30765463›Full record

ArticleThe Journal of experimental medicine2019

The transcription factor Duxbl mediates elimination of pre-T cells that fail β-selection.

Fabian Klein, Mladen Mitrovic, Julien Roux, Corinne Engdahl, Lilly von Muenchow, Llucia Alberti-Servera, Hans Jörg Fehling, Pawel Pelczar, Antonius Rolink, Panagiotis Tsapogas

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Influence ofInternational journal of molecular sciences · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. HeterozygousScience immunology · 2021
    Observational
  9. Cutting Edge: TCR-β Selection Is Required at the CD4Journal of immunology (Baltimore, Md. : 1950) · 2021
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Fabian KleinDevelopmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland f.klein@unibas.ch.ORCID 0000-0002-6208-8592
Mladen MitrovicImmune Regulation, Department of Biomedicine, University of Basel, Basel, Switzerland.ORCID 0000-0002-5561-6676
Julien RouxBioinformatics Core Facility, Department of Biomedicine, University of Basel, Basel, Switzerland.ORCID 0000-0002-4192-5099
Corinne EngdahlDevelopmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland.
Lilly von MuenchowDevelopmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland.ORCID 0000-0001-5394-5727
Llucia Alberti-ServeraDevelopmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland.
Hans Jörg FehlingInstitute of Immunology, University Hospital, Ulm, Germany.ORCID 0000-0002-4580-1990
Pawel PelczarCenter for Transgenic Models, University of Basel, Basel, Switzerland.ORCID 0000-0003-0189-6868
Antonius RolinkDevelopmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland.
Panagiotis TsapogasDevelopmental and Molecular Immunology, Department of Biomedicine, University of Basel, Basel, Switzerland panagiotis.tsapogas@unibas.ch.ORCID 0000-0002-9450-2604
University of Basel · CHSIB Swiss Institute of Bioinformatics · CHUniversity Hospital Ulm · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

T cell development is critically dependent on successful rearrangement of antigen-receptor chains. At the β-selection checkpoint, only cells with a functional rearrangement continue in development. However, how nonselected T cells proceed in their dead-end fate is not clear. We identified low CD27 expression to mark pre-T cells that have failed to rearrange their β-chain. Expression profiling and single-cell transcriptome clustering identified a developmental trajectory through β-selection and revealed specific expression of the transcription factor Duxbl at a stage of high recombination activity before β-selection. Conditional transgenic expression of Duxbl resulted in a developmental block at the DN3-to-DN4 transition due to reduced proliferation and enhanced apoptosis, whereas RNA silencing of Duxbl led to a decrease in apoptosis. Transcriptome analysis linked Duxbl to elevated expression of the apoptosis-inducing Oas/RNaseL pathway. RNaseL deficiency or sustained Bcl2 expression led to a partial rescue of cells in Duxbl transgenic mice. These findings identify Duxbl as a regulator of β-selection by inducing apoptosis in cells with a nonfunctional rearrangement.

Indexed as

AnimalsApoptosisFemaleGene Expression RegulationHomeodomain ProteinsMaleMice, Inbred C57BLMice, TransgenicReceptors, Antigen, T-Cell, alpha-betaThymus GlandT-LymphocytesTranscription FactorsTumor Necrosis Factor Receptor Superfamily, Member 7Duxbl protein, mouseHomeodomain ProteinsReceptors, Antigen, T-Cell, alpha-betaTranscription FactorsTumor Necrosis Factor Receptor Superfamily, Member 7

Identifiers

PMID30765463
PMCPMC6400535
OpenAlexW2913465556

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.