Evidence map›Paper›PMID 30764743›Full record

ArticleNeural computation2019

Deconstructing Odorant Identity via Primacy in Dual Networks.

Daniel R Kepple, Hamza Giaffar, Dmitry Rinberg, Alexei A Koulakov

Abstract read
In one paragraph

Article in Neural computation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Order code in the olfactory system.bioRxiv : the preprint server for biology · 2025
    Article
  2. Simultaneous detection and estimation in olfactory sensing.bioRxiv : the preprint server for biology · 2025
    Article
  3. Bilateral Optogenetic Stimulation of the Olfactory Bulb of OMP-ChIEF Mice.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Neural Circuits for Fast Poisson Compressed Sensing in the Olfactory Bulb.Advances in neural information processing systems · 2023
    Article
  10. Disorder and the Neural Representation of Complex Odors.Frontiers in computational neuroscience · 2022
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Daniel R KeppleCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, U.S.A. dkepple@cshl.edu.
Hamza GiaffarCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, U.S.A. hgiaffar@cshl.edu.
Dmitry RinbergNeuroscience Institute, New York University School of Medicine, New York, NY 10016, U.S.A. rinberg@nyu.edu.
Alexei A KoulakovCold Spring Harbor Laboratory, Cold Spring Harbor, NY 11724, U.S.A. akula@cshl.edu.

Funding

A high-throughput sequencing and imaging approach to understand the functional basis of olfactionR01DC017876 · NIDCD · COLD SPRING HARBOR LABORATORY · PI ALBEANU, DINU FLORENTIN, KOULAKOV, ALEXEI · 2018 to 2022
$5.3M
CSHL Watson School of Biological SciencesT32GM065094 · NIGMS · COLD SPRING HARBOR LABORATORY · PI GANN, ALEXANDER · 2002 to 2021
$4.8M
CRCNS: Sparse odor coding in the olfactory bulbR01DC014366 · NIDCD · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI KOULAKOV, ALEXEI, RINBERG, DMITRY · 2014 to 2018
$1.8M
KITP Interdisciplinary Biology InitiativeR25GM067110 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI SHRAIMAN, BORIS I · 2003 to 2018
$1.8M
NIDCD NIH HHS R01 DC014366NIDCD NIH HHS R01 DC017876NIGMS NIH HHS R25 GM067110NIGMS NIH HHS T32 GM065094NIH HHS R25GM067110
6 · The paper itself

Abstract

In the olfactory system, odor percepts retain their identity despite substantial variations in concentration, timing, and background. We study a novel strategy for encoding intensity-invariant stimulus identity that is based on representing relative rather than absolute values of stimulus features. For example, in what is known as the primacy coding model, odorant identities are represented by the conditions that some odorant receptors are activated more strongly than others. Because, in this scheme, odorant identity depends only on the relative amplitudes of olfactory receptor responses, identity is invariant to changes in both intensity and monotonic nonlinear transformations of its neuronal responses. Here we show that sparse vectors representing odorant mixtures can be recovered in a compressed sensing framework via elastic net loss minimization. In the primacy model, this minimization is performed under the constraint that some receptors respond to a given odorant more strongly than others. Using duality transformation, we show that this constrained optimization problem can be solved by a neural network whose Lyapunov function represents the dual Lagrangian and whose neural responses represent the Lagrange coefficients of primacy and other constraints. The connectivity in such a dual network resembles known features of connectivity in olfactory circuits. We thus propose that networks in the piriform cortex implement dual computations to compute odorant identity with the sparse activities of individual neurons representing Lagrange coefficients. More generally, we propose that sparse neuronal firing rates may represent Lagrange multipliers, which we call the dual brain hypothesis. We show such a formulation is well suited to solve problems with multiple interacting relative constraints.

Indexed as

Models, NeurologicalAction PotentialsAlgorithmsAnimalsHumansOdorantsOlfactory PathwaysOlfactory PerceptionOlfactory Receptor NeuronsReceptors, OdorantSmellReceptors, Odorant

Identifiers

PMID30764743
PMCPMC7449618

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.