Evidence map›Paper›PMID 30764717›Full record

ArticleEpigenetics2019

Longitudinal analysis of epigenome-wide DNA methylation reveals novel smoking-related loci in African Americans.

Jiaxuan Liu, Wei Zhao, Farah Ammous, Stephen T Turner, Thomas H Mosley, Xiang Zhou, Jennifer A Smith

Open access · bronzeAbstract read
In one paragraph

Article in Epigenetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Airway Aging and Methylation Disruptions in HIV-associated Chronic Obstructive Pulmonary Disease.American journal of respiratory and critical care medicine · 2022
    Article
  5. Article
  6. Review
  7. Education and Lifestyle Factors Are Associated with DNA Methylation Clocks in Older African Americans.International journal of environmental research and public health · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jiaxuan Liua Department of Epidemiology , School of Public Health, University of Michigan , Ann Arbor , MI , USA.ORCID 0000-0002-8955-5832
Wei Zhaoa Department of Epidemiology , School of Public Health, University of Michigan , Ann Arbor , MI , USA.ORCID 0000-0001-7388-0692
Farah Ammousa Department of Epidemiology , School of Public Health, University of Michigan , Ann Arbor , MI , USA.
Stephen T Turnerb Division of Nephrology and Hypertension , Mayo Clinic , Rochester , MN , USA.
Thomas H Mosleyc Memory Impairment and Neurodegenerative Dementia (MIND) Center , University of Mississippi Medical Center , Jackson , MS , USA.
Xiang Zhoud Department of Biostatistics , School of Public Health, University of Michigan , Ann Arbor , MI , USA.ORCID 0000-0002-4331-7599
Jennifer A Smitha Department of Epidemiology , School of Public Health, University of Michigan , Ann Arbor , MI , USA.ORCID 0000-0002-3575-5468
University of Michigan · USMayo Clinic · USUniversity of Mississippi Medical Center · US

Funding

The Family Blood Pressure Program (GENOA Network)U01HL054481 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BOERWINKLE, ERIC A · 2000 to 2007
$6.7M
A Social Epigenomic Approach to Health Disparities in Cardiovascular Risk FactorsR01HL141292 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SMITH, JENNIFER ANN · 2018 to 2021
$2.9M
GENETIC DETERMINANTS OF HIGH BP IN THREE RACIAL GROUPSU01HL054457 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2000 to 2004
$2.8M
NHLBI FAMILY BLOOD PRESSURE PROGRAM (GENOA)U01HL054464 · NHLBI · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI TURNER, STEPHEN T · 2000 to 2004
$2.6M
Predictors of Coronary Artery Calcification in an African-American CohortR01HL085571 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PEYSER, PATRICIA ANN · 2007 to 2010
$2.5M
Epigenetics of Arteriosclerosis in African American Hypertensive SibshipsR01HL133221 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SMITH, JENNIFER ANN · 2016 to 2019
$2.2M
Genetic Mechanisms of Arteriosclerosis in Hypertensive SibshipsR01HL119443 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2014 to 2017
$2.1M
Epigenetic Biomarkers of Common Chronic DiseasesRC1HL100185 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI KARDIA, SHARON L · 2009 to 2010
$999k
GENETIC DETERMINANTS OF HIGH BP IN THREE RACIAL GROUPSU10HL054457 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SING, CHARLES F · 1995 to 1999
–
GENETIC DETERMINANTS OF HIGH BP IN THREE RACIAL GROUPSU10HL054464 · NHLBI · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI TURNER, STEPHEN T · 1995 to 1999
–
GENETIC DETERMINANTS OF HIGH BP IN THREE RACIAL GROUPSU10HL054481 · NHLBI · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI BOERWINKLE, ERIC A · 1995 to 1999
–
NHLBI NIH HHS R01 HL085571NHLBI NIH HHS R01 HL119443NHLBI NIH HHS R01 HL133221NHLBI NIH HHS R01 HL141292NHLBI NIH HHS RC1 HL100185NHLBI NIH HHS U01 HL054457NHLBI NIH HHS U01 HL054464NHLBI NIH HHS U01 HL054481NHLBI NIH HHS U10 HL054457NHLBI NIH HHS U10 HL054464NHLBI NIH HHS U10 HL054481
6 · The paper itself

Abstract

Changes in DNA methylation may be a potential mechanism that mediates the effects of smoking on physiological function and subsequent disease risk. Given the dynamic nature of the epigenome, longitudinal studies are indispensable for investigating smoking-induced methylation changes over time. Using blood samples collected approximately five years apart in 380 African Americans (mean age 60.7 years) from the Genetic Epidemiology Network of Arteriopathy (GENOA) study, we measured DNA methylation levels using Illumina HumanMethylation BeadChips. We evaluated the association between Phase 1 smoking status and rate of methylation change, using generalized estimating equation models. Among the 6958 CpG sites examined, smoking status was associated with methylation change for 22 CpGs (false discovery rate q < 0.1), with the majority (91%) becoming less methylated over time. Methylation change was greater in ever smokers than never smokers, and the absolute differences in rates of change ranged from 0.18 to 0.77 per decade in M value, equivalent to a

Indexed as

DNA MethylationAdultAgedAged, 80 and overBlack or African AmericanCigarette SmokingCpG IslandsCross-Sectional StudiesEpigenomicsFemaleGenetic Association StudiesGenetic LociHumansLongitudinal StudiesMaleMiddle AgedDNA methylationepigenome-wide association studylongitudinal analysisSmoking

Identifiers

PMID30764717
PMCPMC6557606
OpenAlexW2914403152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.