Evidence map›Paper›PMID 30764505›Full record

ArticleInternational journal of molecular sciences2019

The Membrane Proximal Domain of TRPV1 and TRPV2 Channels Mediates Protein⁻Protein Interactions and Lipid Binding In Vitro.

Pau Doñate-Macián, Elena Álvarez-Marimon, Francesc Sepulcre, José Luis Vázquez-Ibar, Alex Perálvarez-Marín

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.4field-weighted citation impact, top 45% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. TRPV2: A Key Player in Myelination Disorders of the Central Nervous System.International journal of molecular sciences · 2022
    Article
  6. A Model System to Explore the Detection Limits of Antibody-Based Immuno-SPECT Imaging of Exclusively Intranuclear Epitopes.Journal of nuclear medicine : official publication, Society of Nuclear Medicine · 2021
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Pau Doñate-MaciánBiophysics Unit, Department of Biochemistry and Molecular Biology, School of Medicine, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallés, Catalonia, Spain. pabdoama@gmail.com.ORCID 0000-0002-8297-2035
Elena Álvarez-MarimonBiophysics Unit, Department of Biochemistry and Molecular Biology, School of Medicine, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallés, Catalonia, Spain. elena.alvarez@uab.cat.
Francesc SepulcreDepartament d'Enginyeria Agroalimentària i Biotecnologia, Universitat Politècnica de Catalunya, 08860 Barcelona, Catalonia, Spain. francesc.sepulcre@upc.edu.
José Luis Vázquez-IbarInstitut de Biologie Intégrative de la Cellule, CEA-Saclay, 91191 Gif-sur-Yvette, France. jose-luis.vazquez-ibar@i2bc.paris-saclay.fr.
Alex Perálvarez-MarínBiophysics Unit, Department of Biochemistry and Molecular Biology, School of Medicine, Universitat Autònoma de Barcelona, 08193 Cerdanyola del Vallés, Catalonia, Spain. alex.peralvarez@uab.cat.ORCID 0000-0002-3457-0875
Universitat Autònoma de Barcelona · ESCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRUniversitat Politècnica de Catalunya · ES

Funding

European Commission PIOF-GA-2009-237120Generalitat de Catalunya FI-2013FIB00251Ministerio de Ciencia e Innovación SAF2010-21385Universitat Autònoma de Barcelona-Programa Banco de Santander Fellowship NA
6 · The paper itself

Abstract

Constitutive or regulated membrane protein trafficking is a key cell biology process. Transient receptor potential channels are somatosensory proteins in charge of detecting several physical and chemical stimuli, thus requiring fine vesicular trafficking. The membrane proximal or pre-S1 domain (MPD) is a highly conserved domain in transient receptor potential channels from the vanilloid (TRPV) subfamily. MPD shows traits corresponding to protein-protein and lipid-protein interactions, and protein regulatory regions. We have expressed MPD of TRPV1 and TRPV2 as green fluorescente protein (GFP)-fusion proteins to perform an in vitro biochemical and biophysical characterization. Pull-down experiments indicate that MPD recognizes and binds Soluble N-ethylmaleimide-sensitive factor Attachment Protein Receptors (SNARE). Synchrotron radiation scattering experiments show that this domain does not self-oligomerize. MPD interacts with phosphatidic acid (PA), a metabolite of the phospholipase D (PLD) pathway, in a specific manner as shown by lipid strips and Trp fluorescence quenching experiments. We show for the first time, to the best of our knowledge, the binding to PA of an N-terminus domain in TRPV channels. The presence of a PA binding domain in TRPV channels argues for putative PLD regulation. Findings in this study open new perspectives to understand the regulated and constitutive trafficking of TRPV channels exerted by protein-protein and lipid-protein interactions.

Indexed as

Protein Interaction MapsAnimalsExocytosisHEK293 CellsHumansLipid MetabolismModels, MolecularPhosphatidic AcidsProtein BindingProtein Interaction Domains and MotifsRatsSNARE ProteinsTRPV Cation ChannelsPhosphatidic AcidsSNARE ProteinsTrpv1 protein, ratTrpv2 protein, ratTRPV Cation Channelsbiophysicsexocytosislipid-protein interactionsprotein–protein interactionsTransient Receptor Potential (TRP) channels

Identifiers

PMID30764505
PMCPMC6387362
OpenAlexW2913387543

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.