Evidence map›Paper›PMID 30763456›Full record

ArticleHuman mutation2019

Targeted resequencing of 358 candidate genes for autism spectrum disorder in a Chinese cohort reveals diagnostic potential and genotype-phenotype correlations.

Wei-Zhen Zhou, Jie Zhang, Ziyi Li, Xiaojing Lin, Jiarui Li, Sheng Wang, Changhong Yang, Qixi Wu, Adam Yongxin Ye, Meng Wang and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Human mutation, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 1 synthesis or guideline pooled it, 45 citations in OpenAlex.

  1. Pooled it
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  3. Article
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  5. Article
  6. Article
  7. Evolution is in the details: Regulatory differences in modern human and Neanderthal.Computational and structural biotechnology journal · 2025
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  8. Profiles of minimally verbal autistic children: Illuminating the neglected end of the spectrum.Autism research : official journal of the International Society for Autism Research · 2024
    Article
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  13. Review
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  15. Identification of novelFrontiers in neuroscience · 2023
    Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Wei-Zhen ZhouCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Jie ZhangCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Ziyi LiCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Xiaojing LinNational Institute of Biological Sciences, Beijing, China.
Jiarui LiCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Sheng WangNational Institute of Biological Sciences, Beijing, China.
Changhong YangNational Institute of Biological Sciences, Beijing, China.
Qixi WuSchool of Life Sciences, Peking University, Beijing, China.
Adam Yongxin YeCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Meng WangCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.
Dandan WangNational Institute of Biological Sciences, Beijing, China.
Tad Zhengzhang PuShanghai United Family Hospital and Clinics, Shanghai, China.
Yu-Yu WuYuning Psychiatry Clinic, Taipei, Taiwan.
Liping WeiCenter for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, School of Life Sciences, Peking University, Beijing, China.ORCID 0000-0002-1795-8755
Peking University · CNNational Institute of Biological Sciences, Beijing · CNBeijing Normal University · CNBeijing United Family Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNKaiping Central Hospital · CNKing University · US

Funding

Ministry of Science and Technology 863 China 2015AA020108National Natural Science Foundation of China 31530092
6 · The paper itself

Abstract

Autism spectrum disorder (ASD) is a childhood neuropsychiatric disorder with a complex genetic architecture. The diagnostic potential of a targeted panel of ASD genes has only been evaluated in small cohorts to date and is especially understudied in the Chinese population. Here, we designed a capture panel with 358 genes (111 syndromic and 247 nonsyndromic) for ASD and sequenced a Chinese cohort of 539 cases evaluated with the Autism Diagnostic Interview-Revised (ADI-R) and the Autism Diagnostic Observation Schedule (ADOS) as well as 512 controls. ASD cases were found to carry significantly more ultra-rare functional variants than controls. A subset of 78 syndromic and 54 nonsyndromic genes was the most significantly associated and should be given high priority in the future screening of ASD patients. Pathogenic and likely pathogenic variants were detected in 9.5% of cases. Variants in SHANK3 and SHANK2 were the most frequent, especially in females, and occurred in 1.2% of cases. Duplications of 15q11-13 were detected in 0.8% of cases. Variants in CNTNAP2 and MEF2C were correlated with epilepsy/tics in cases. Our findings reveal the diagnostic potential of ASD genetic panel testing and new insights regarding the variant spectrum. Genotype-phenotype correlations may facilitate the diagnosis and management of ASD.

Indexed as

Gene Regulatory NetworksMutationAdultAsian PeopleAutism Spectrum DisorderCohort StudiesEarly DiagnosisFemaleGenetic Association StudiesGenetic Predisposition to DiseaseHumansMaleMEF2 Transcription FactorsMembrane ProteinsMiddle AgedNerve Tissue ProteinsCNTNAP2 protein, humanMEF2C protein, humanMEF2 Transcription FactorsMembrane ProteinsNerve Tissue ProteinsSHANK2 protein, humanSHANK3 protein, humanautismChinesegenetic testingtargeted resequencing

Identifiers

PMID30763456
PMCPMC6593842
OpenAlexW2915067238

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.