Evidence map›Paper›PMID 30763392›Full record

ArticlePloS one2019

Discrimination of breast cancer from benign tumours using Raman spectroscopy.

Fiona M Lyng, Damien Traynor, Thi Nguyet Que Nguyen, Aidan D Meade, Fazle Rakib, Rafif Al-Saady, Erik Goormaghtigh, Khalid Al-Saad, Mohamed H Ali

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
8.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 50 citations in OpenAlex.

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  20. TheCancers · 2019
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Fiona M LyngCentre for Radiation and Environmental Science, FOCAS Research Institute, Technological University Dublin, Dublin, Ireland.
Damien TraynorCentre for Radiation and Environmental Science, FOCAS Research Institute, Technological University Dublin, Dublin, Ireland.
Thi Nguyet Que NguyenCentre for Radiation and Environmental Science, FOCAS Research Institute, Technological University Dublin, Dublin, Ireland.ORCID 0000-0002-7103-6049
Aidan D MeadeCentre for Radiation and Environmental Science, FOCAS Research Institute, Technological University Dublin, Dublin, Ireland.
Fazle RakibDepartment of Chemistry and Earth Sciences, Qatar University, Doha, Qatar.ORCID 0000-0001-8905-7297
Rafif Al-SaadyPathology and Laboratory Medicine, Al Ahli Hospital, Doha, Qatar.
Erik GoormaghtighCenter for Structural Biology and Bioinformatics, Laboratory for the Structure and Function of Biological Membranes, Université Libre de Bruxelles, Brussels, Belgium.
Khalid Al-SaadDepartment of Chemistry and Earth Sciences, Qatar University, Doha, Qatar.
Mohamed H AliQatar Biomedical Research Institute, Doha, Qatar.ORCID 0000-0002-7698-1592
Technological University Dublin · IEQatar University · QAAl-Ahli Hospital · QAUniversité Libre de Bruxelles · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer is the most common cancer among women worldwide, with an estimated 1.7 million cases and 522,000 deaths in 2012. Breast cancer is diagnosed by histopathological examination of breast biopsy material but this is subjective and relies on morphological changes in the tissue. Raman spectroscopy uses incident radiation to induce vibrations in the molecules of a sample and the scattered radiation can be used to characterise the sample. This technique is rapid and non-destructive and is sensitive to subtle biochemical changes occurring at the molecular level. This allows spectral variations corresponding to disease onset to be detected. The aim of this work was to use Raman spectroscopy to discriminate between benign lesions (fibrocystic, fibroadenoma, intraductal papilloma) and cancer (invasive ductal carcinoma and lobular carcinoma) using formalin fixed paraffin preserved (FFPP) tissue. Haematoxylin and Eosin stained sections from the patient biopsies were marked by a pathologist. Raman maps were recorded from parallel unstained tissue sections. Immunohistochemical staining for estrogen receptor (ER) and human epidermal growth factor receptor 2 (HER2/neu) was performed on a further set of parallel sections. Both benign and cancer cases were positive for ER while only the cancer cases were positive for HER2. Significant spectral differences were observed between the benign and cancer cases and the benign cases could be differentiated from the cancer cases with good sensitivity and specificity. This study has shown the potential of Raman spectroscopy as an aid to histopathological diagnosis of breast cancer, in particular in the discrimination between benign and malignant tumours.

Indexed as

BreastBreast NeoplasmsDiscriminant AnalysisErb-b2 Receptor Tyrosine KinasesFemaleHumansHyperplasiaPrincipal Component AnalysisReceptors, EstrogenSensitivity and SpecificitySpectrum Analysis, RamanSupport Vector MachineERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesReceptors, Estrogen

Identifiers

PMID30763392
PMCPMC6375635
OpenAlexW2912584983

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.