Evidence map›Paper›PMID 30763264›Full record

ArticleJournal of integrative bioinformatics2019

QSAR Modelling to Identify LRRK2 Inhibitors for Parkinson's Disease.

Víctor Sebastián-Pérez, María Jimena Martínez, Carmen Gil, Nuria Eugenia Campillo, Ana Martínez, Ignacio Ponzoni

Open access · diamondAbstract read
In one paragraph

Article in Journal of integrative bioinformatics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Víctor Sebastián-PérezCentro de Investigaciones Biológicas (CIB-CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain.ORCID https://orcid.org/0000-0002-8248-4496
María Jimena MartínezInstituto de Ciencias e Ingeniería de la Computación (UNS-CONICET), Departamento de Ciencias e Ingeniería de la Computación, Universidad Nacional del Sur (UNS), Bahía Blanca, Argentina.ORCID https://orcid.org/0000-0002-0443-5795
Carmen GilCentro de Investigaciones Biológicas (CIB-CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain.ORCID https://orcid.org/0000-0002-3882-6081
Nuria Eugenia CampilloCentro de Investigaciones Biológicas (CIB-CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain.ORCID https://orcid.org/0000-0002-9948-2665
Ana MartínezCentro de Investigaciones Biológicas (CIB-CSIC), Ramiro de Maeztu 9, 28040 Madrid, Spain.ORCID https://orcid.org/0000-0002-2707-8110
Ignacio PonzoniInstituto de Ciencias e Ingeniería de la Computación (UNS-CONICET), Departamento de Ciencias e Ingeniería de la Computación, Universidad Nacional del Sur (UNS), Bahía Blanca, Argentina.ORCID https://orcid.org/0000-0002-6923-9592
Centro de Investigaciones Biológicas Margarita Salas · ESConsejo Nacional de Investigaciones Científicas y Técnicas · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parkinson's disease is one of the most common neurodegenerative illnesses in older persons and the leucine-rich repeat kinase 2 (LRRK2) is an auspicious target for its pharmacological treatment. In this work, quantitative structure-activity relationship (QSAR) models for identification of putative inhibitors of LRRK2 protein are developed by using an in-house chemical library and several machine learning techniques. The methodology applied in this paper has two steps: first, alternative subsets of molecular descriptors useful for characterizing LRRK2 inhibitors are chosen by a multi-objective feature selection method; secondly, QSAR models are learned by using these subsets and three different strategies for supervised learning. The qualities of all these QSAR models are compared by classical metrics and the best models are discussed in statistical and physicochemical terms.

Indexed as

Models, MolecularQuantitative Structure-Activity RelationshipComputer SimulationHumansLeucine-Rich Repeat Serine-Threonine Protein Kinase-2Molecular StructureParkinson DiseaseProtein Kinase InhibitorsLeucine-Rich Repeat Serine-Threonine Protein Kinase-2LRRK2 protein, humanProtein Kinase InhibitorsCheminformaticsLRRK2Machine LearningParkinson’s diseaseQSAR

Identifiers

PMID30763264
PMCPMC6798859
OpenAlexW2913248954

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.